Gene detail

Detailed information of pspe_0.1.m1.41025.m1 in Pachyseris speciosa

Genomic Location: Sc0000410:294111...296987
NR annotation: CAH3029714.1, unnamed protein product [Porites evermanni]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P49925	Homeobox protein Hox-C6 OS=Ovis aries OX=9940 GN=HOXC6 PE=2 SV=1
P09630	Homeobox protein Hox-C6 OS=Homo sapiens OX=9606 GN=HOXC6 PE=1 SV=3
P10629	Homeobox protein Hox-C6 OS=Mus musculus OX=10090 GN=Hoxc6 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45664	PROTEIN ZERKNUELLT 1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0009952	Biological Process	anterior/posterior pattern specification	Interproscan
GO:0048704	Biological Process	embryonic skeletal system morphogenesis	Interproscan