Gene detail

Detailed information of pspe_0.1.m1.41166.m1 in Pachyseris speciosa

Genomic Location: Sc0000413:358090...362090
NR annotation: XP_044166213.1, uncharacterized protein LOC122950196 [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P23198	Chromobox protein homolog 3 OS=Mus musculus OX=10090 GN=Cbx3 PE=1 SV=2
Q13185	Chromobox protein homolog 3 OS=Homo sapiens OX=9606 GN=CBX3 PE=1 SV=4
Q5R6X7	Chromobox protein homolog 3 OS=Pongo abelii OX=9601 GN=CBX3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00385	Chromo	Chromo (CHRromatin Organisation MOdifier) domain	Domain	Interproscan
PF13650	Asp_protease_2	Aspartyl protease	Domain	Interproscan
PF00692	dUTPase	dUTPase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000953	Domain	Chromo/chromo shadow domain	Interproscan
IPR036157	Homologous_superfamily	dUTPase-like superfamily	Interproscan
IPR023780	Domain	Chromo domain	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR051219	Family	Heterochromatin-associated chromo domain-containing protein	Interproscan
IPR016197	Homologous_superfamily	Chromo-like domain superfamily	Interproscan
IPR023779	Conserved_site	Chromo domain, conserved site	Interproscan
IPR001995	Domain	Peptidase A2A, retrovirus, catalytic	Interproscan
IPR029054	Domain	dUTPase-like	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22812	CHROMOBOX PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000122	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0005721	Cellular Component	pericentric heterochromatin	Interproscan
GO:0006325	Biological Process	chromatin organization	Interproscan
GO:0035064	Molecular Function	methylated histone binding	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02338	dnaN; DNA polymerase III subunit beta	EC:2.7.7.7	DNA repair and recombination proteins	ko03400	deepkoala