Gene detail

Detailed information of pspe_0.1.m1.41423.m1 in Pachyseris speciosa

Genomic Location: Sc0000418:460292...470848
NR annotation: CAB3978349.1, Hypothetical predicted protein [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

pspe_0.1.m1.41423.m1

ATGACACTTTGGGATCAAAACGATCGCTTTACCGTTGCACATTGCAGTAGAACGATGGCCATGTCGACATACGAAGGGTCCTATATAAAGTACTTTGGAAAGAGGTTTGAAAATCTTTCACCAAGCTCTACTGACGAGGACGTTAGACATCTATATGACGAGTGGGCAGAAGCATATGACAAGGACAACGCTTCAGCCGGCTCCGCCTTTCGCAAACCACTTGCGGAACTTTTGGATGGTGCACTGACGGACGCTTTTCCCAACAAACCGAAAGATCAACACAAAATCATCGACGCAGGGGCAGGGACAGGGGCGGCAGCAATAGAACTTCAAAAACTCGGCTACAGTGACATGGATGCCTTGGATATCTcacaagaaatgttgaatgagGCCAAAAAGAAAGGCATGCCGTACAAGCGGCTCATCTGCGCCCCCCTGACAGAAACTCCAGTTCCGGAGATCGAAACAGGAGAGTTTGATGGCCTTATTTCCGCCAGTGTCTTGGTGAAGGCGCATGTGCGCCCCTCTGCATTGGTTGAGATGATTCGAATGGTTAAGTCCGGTGGCTTTCTGTCTTTCAATATTCGCTGCAACGAACTGGAAGACTACGAACCGAAGATGGCGGAACTGGAGAAAGCTGGCATGTGGGAAAGAGTCTGCAAGACAACAATAAGTTATTTTGAGAAAGATGACTTGCCGAAAGAAGCTTTCGGCTTCTTGTACAAACGAAAGCTGTTTGTATCGCGGCCGGTGTGTTTATGGATGAAGCATGGATATCTTTGTTATTCTCTCTCTGTTAAAATTGACATAACTGTCCATATGGATGTTGAACTAAATCCTGGACCAACTTCTTCGTCTTCAAGACCCACATGGAAGCGGCCCTATCGTGGATGCCGGAGTGGAAGAACGGTCAGGGCGCGTGAAGCAACGAAGGTTTTTAATATTCAAGCCGCCATGACACCTCGTCGTCACCAATTTGCATTTCACTCAGGACGCAATGACAACAATCTTGTTCGTATTCCGCTGATATCACCTCGGTCATGCTGTCGTCCACCACTACGTTTCGGTGTTTGGAATGCTCGCTCACTGAAAACCAAAGTATCGTCGCTATGTGATCTTATGTTATCTCATCGTCTTGACCTCTTATCTGTGACTGAATCGTGGCTTACCGCGAACGATAGCATCACCATCGCCGACCTTACGAATTCACTTAATGATTACGCTGTTTATCACCTGCCAAGAACCACTTGTAGAGGAGGTGGACTTGCTGTTATCGCACGGAAAGGGCTCCAAGTTACGCGAAATGAAGGCTgtattttttctactttcgAACATTTTGATTTAACTGTCACCTCTGGTAATAAGGTTTTTCGCCTTGTGACAGTATATCGGCCTCCACCGTCCAAGAAAAATGGCTTTACAGTAGAAAAGTTTTTCTCAGAATTCTCTGCGTTCTTAGAGGAGTTGACTGTTATATCCTATCAATTTCTTCTTTGTGGTGATTTCAACTTTCATGTTGATGAcaatgcaaatgcaaacgctAAACAATTCCACGATCTTCTTTTTTCTGCAGATCTGAAACAGCATGTTAATGGCCCTACCCATCGTTTGGGTCATACTTTGGATCTTCTCATCACTCGCGAGATGGATACTCTAATTTCTCATACAAGAATTTTACCAGATCTTCTCTCTGACCATCTAGCGGTTGTGTGCTTCATAAATTTACCGCGGCCTCCTGCCACTCGTATAACTGTTACGCGTCGGAAGACTCGGGACATCGATCTTGATGCTTTTCGGAAGGACATCTCCCGTGCCTTCTCTAAGGAACCAGTTGATGACTTGGACGACAAGATAACTGCGTTTGATAACACATTGCGTCTTCTACTTGACAAGTACGCCCCAGAACAAACTAGGAATATAACCCTTAGGCCACACGCGCCTTGGTTCTCAGATGATCTTCGCGAATTAAAACGTGTTAAAAGGcgctgtgaaagaaaattccaatccactaagttatcagtcgacaagcaaatTTACTATCAAGCCTGCCGCAATTATAATCGCTTGTTGGAGGTTTCGAAAACCAATTACTTGAAGGACAAATTTAGTACGTCTAATATGAAGCAGCTTTTCAAGCTCGTTGATGGTATGTTCAGCGTAAAGTCTTCTCCAACTCTACCGACACATGACTCTCTTGAACATTTGGTTGAGAGTTTTGGCGACTTCTTCGAATCTAAAATCATCAATATCAGACGTTCTCTCTCTCAACAACCCTCCTCGCGGCCTAAATGTGTGACTGATGTATCGTGCTCTACCTCCTTCAGTCAGTTTGATCAC

Transcript

pspe_0.1.m1.41423.m1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan
PF08241	Methyltransf_11	Methyltransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR013216	Domain	Methyltransferase type 11	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46670	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0008757	Molecular Function	S-adenosylmethionine-dependent methyltransferase activity	Interproscan