Gene detail

Detailed information of pspe_0.1.m1.41617.m1 in Pachyseris speciosa

Genomic Location: Sc0000422:272114...294626
NR annotation: XP_029185133.1, protein arginine N-methyltransferase 1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

pspe_0.1.m1.41617.m1

Transcript

pspe_0.1.m1.41617.m1

ATGGAAAAAGGAGAGGTCTGCAGGCAGGTTTCGGGAATTTCTAGGCCCGTGCAGGAGTCTTCTAATGGAATGGAAGTCGATTCAGCGACGACGAATCATGTCGAAGCAGCTAACAAGGGACAAAGTCTGCAACAACCTTCCACAACACCAGATTGTCGACCGCCTGCTTCTGAGATGACGAGCGCTGATTACTACTTCGATTCTTACGCTCATTTCGATGAGGTACGCACAACAACATATCGGAATGCTATGTATTATAACAGACATCTGTTTCGAGACAAGGTTGTTCTTGATGTGGGTTGTGGCACTGGGATTTTATCGATGTTTGCTGCCAAGGCGGGTGCCAAACATGTTTATGCTGTTGACTTCTCTTCAATCATCGACTATTCCAGACAGATAATCAAAGACAACAACTTTGAAGAAGTTGTTACCCTCATCAAAGGAAAAATAGAAGAAATTGAGTTGCCTGTTGACAAGGTGGACATCATCATTAGTGAATGGATGGGTTACTGTCTTTTATATGAGTCTATGTTAGACACTGTATTATTTGCCAGGGACAAGTGGCTGAAACCTGACGGACTGTTGTTTCCAGACAAGGCACAACTGTTTCTATGTGCTATTGAAGACAGGCAATACAAAGAAGATAAAATTTATTGGTGGGACAATGTTTATGGATTTGACATGAGCTGTATAAGAAAGGTGGCACTAACTGAACCTTTGGTGGATGTAGTTGAGGCGAAACAAGTTGTTACAAACTCCTGTTTAGTCAAGGAAATTGATTTGCATACAGTCAAGAAAGAAGATCTGTCTTTCACTGCTCCTTACCAGTTGTACTGCCGTAGAAATGATTACATCCATGCCCTTGTCGCCTTCTTTACTATCGAGTTCACACACTGTCATAAAAGAACAGGTTTCTCAACTGCCCCAGACTGCCACTATACCCACTGGAAGCAAACAGTGTTTTATCTTCAGGACTATCTAACAGTCAAGTATGGGGAGGAGTTGTGTGGTGAATTCAAAATGCAACCAAACCCCAGAAATAATCGTGATCTTGATTTTATGATCAGTGCAAAGTTTAATGGAGAGCTCTGTAACTACGAGTCCTCAGCCAACTACCGCATGCCATTTACTCGCAAGAAGTTCGTTGATCCAAACACCTTGACTTCCACTCAGCTGAACCGCTGTTTATCAATATTCGACTTAACTGCTCTCGGTGTTGGAAGCACTCTGGGAGCCGGAATATACGTGTTGGCTGGAGATGTCGCTCGTAATGACGCAGGCCCAGTTGCCAGAGCGTGGAGCTCGTATTTTGACTCTCTTTTCGATGACAGAATTAAAAATTTTACCATTTCCACCATCGGCGAGATGCATGGTGCAGGCATCGCAAAGTATCCTGACTTGCTATCCGTGCTGGTAACTCTCATACTGACCATCGTTTTGGCTGTGGGAATTAAGAAAACCTCCTGGTTTAATACCCTATTCACTGGGATCAATTTATTCGTGATCCTGTTCGTGGTGTGTGTAGGTGCGTGCTATGCCGAGCCAAAGAACTGGTCCAATGATTTTTTGCCGCATGGAATGTCCGGAGTGATGGCTGGAGCAGCCACTTGTTTTTATGCATTTGTTGGCTTTGATGTGATTGCAACTACTGGAGAGGAAGCGCGAAACCCAAGTAGAGCTATACCCATCTCAATCGTCTTGGCTCTTGTCGTCATGCCTGGAGATAACTGCGCTGTGTTTGGCTGTGGGAGTTGTAGAAGAACGAAAGGGATCGGCATTTGGAAGTTGCCCGCGGCGAAGGACGAGGCACACAAGAAATGGCGAGACGATTGGTTGAGTGAGATCACAAAGACGCGTGAGATCGACCATGAATTTCGAAAAAGGATCGAAAACGACAAGgATCCAGTAGAGGAGTACTTCGGGGGCCAGCGGAAACTGGGTAGGCGCAGTGACAACCCTGACATAAAAACATTTGGgtacaacagtaacacactaaGAATGCAGAGAACAGTGTCCTGTCAGAGTGGCAACACAAGGGGCCGAAAGGACAAGACACAAGCCTGGGAACAAcggtcaagatggatCAATTCTCTTGCTGTGATTGACTACCTGCCAGGTCAAGATGGAGTCATCTTGACTGCTCGGGATAgtccTGCATCAGCTATTCTGACCTTGATGTGGCCCTACAGCAGCCTTCCAACAGGAGGAACCATACCCAAGGTATTTGCCATGAGAGGTGCCCCCTGGGCCAAATATGTCATCGCTATCGGAGCCCTTTGTGGACTGACTTCATCTCTACTTGGAGCGCTTTTACCATTACCTAGAATGTTCTACTCTATGGCAAGTGACGGCCTCATTTTCAAATTCCTTGCTAAAGTTAATCCAAGGACAGATGTCCCAATGATTGCAACGGTGATATCCGGCGTTTTATCTgcaattcttgctttcatttttaaCTTGGACGACCTGGTACAGATGATGTCGATTGGCACATTGTTAGCCTACACCATGGTCGCCGTGTGTGTTTTGATTCTGAGGTACCAGCCGGGAACTGTGGGCCtcatcaaacaaaacaaatcggAAACCAGTTTGAACAATCAAGCTAATGGCAAAGACAGCTCAGACGAAGATTCGCCACTGGTAGGAATAGACCAGCCCCGACAGCCTTCACAAAGAACAGCGTCGTTAGCGCTGGCAGCCATAGTCACAAGTTGCATTGGTTTAGCAGGGCTCAGCGCATTGATTATTTGGGGCTCGCAAGCTTTATCTCTGGCTAAGTGGTGGGCCATTGTAGCTGTGACGCTGACTAGTTTGATACTCATTGGCTGTACCATATTCCTCTTTTGGTTGCCCCAGAACAAGACGCCCCTACCATTCATGGTGCCTTGTGTCCCCGTGCTCCCACTTGTCACGGTGTTTTTCGACGTTTTTCTGATCTTGAAACTCTCCTACTTAACATGGATACGGTTTGCTGTTTGGATGGCATGtcaatctatttgttttatggTCTGCGGAACAGTGTTGAGGGCCAAAGGCAAGAAAGGTGAAGTCACGTATGAAAGCAAGGAGCAAGGAGATTTGAGATACTCTTGGTGTACATTTACAATATGGCAGCAGGGAATTGAATTGTGATCATGCTTTTTCTCATAACAGAAACTAGtctgatgaaaaaaaaactagaaaaaGAGCAACATTTATGGACGAATGTCATTTAGAAAGCAGTAAAACACTAAAGTTAGATAACAGTAAAAATTACGAAAACAGATGTTTTAAAGtgacaacaactttatttttaaCATTATATACTTATAATGTAAGGTCCCGAGGGGAACAGTTtcgttttcccgagagtcccgATGTTTTCAGAGTCGAAGTCttgggaaacatcaggactctcagGAAAACAGAACTAAGTAGTTTCCCGAGGCCGGGGCCTTACAACAACAAgcattttattttgctcatagaagatatattacaacaaaagaaagataaacttaaataagcaaaaaactaCCCAGAATAGTAAAAACTCAATGAGCTGagaagttacaaaaattattaagcttTAAAGGAAGAATAAGAgaagaaaagaacaaacaaacaaataaaaaacagaaatacaaacaaGCAATAACAGTACCAGTTATTGAGCGAAAAAATTTGTACATTAATTAAGCTAGCATTAGGCGTAAGAACTTAAGACTGAATTGTTTAGTCATagttaaatgaaatgaacgcAGAGATAAAGTTTTTTATCTCTTCGTCCAAGTTGTTCCAAATAGAAGGAGCAGAGAAATGTAAATTGAACTTATCATAATTAGCTCTAACACGATCGATGTAATAAGTTGATTTAGATGCTAGCCTAGTATTATAGTGCGGAATTGTATTGATTAttatcgattgttatcgattttTTGCTGTGAATTCGATTGCTATCGATTATTGATATCAATCGATAGCAATCGGTGATTGATATTGATTGATATCAATTATATCGATTAATTTCCAAtatcgatttctatcgattggCCACCCCTGGGCTAAAGTAATGGCCTGATTATCCTGATTAGTGAGTGCAATGTAATACTTGGGATGATTTATTCAAGTTACTAGTTTTATAGTCATCCTCTTCTTGCAACAAACAAAATAGTAAGTCGATTTTTTCAGTTCCTTCCTTTGCTTACTTGTTGTATCATGCTCATCAGTTAGCCTTTAATGTAGTTTGTTATTAAAACAGATCATGTTTTAATGAGTTCTTGTAACTACAATAGATCAGAGCAGGCTTGTTTAGATAGCCTCCGAATTTATAGATATGTTTGTACGCAGAACGTACTCTTTAAAGAGAAAGGTTACCTCCAATGAAATAGATACAGAATCTTAACCACATACTGTTGTAGAAATTGCAGACGACGCTAAGTTCCACAAATCATTGTTATTTACGTTTCTCTAGGAATCCACTGACCGAGATGTATataatatcattcatttgaacgaggtCACATCAGTAaaataagtgaagtgaagtgaaccaatagcccattttacagttgtgtgctcagtgacctggtctttgagtggaagcgaggctggaggtgaccttgttttgatacagacctcactgcttttctcatgcaaatcatgttgttcttatgctaactagtccacatttgcatgagaaagactgagacgtttgtatcaaaacaaggtcacctccagcctcgcttccattcaatcccaggtcactgagcagacaactgtaaaatgggc

Protein

Uniprot

Uniprot term	Description
Q99873	Protein arginine N-methyltransferase 1 OS=Homo sapiens OX=9606 GN=PRMT1 PE=1 SV=3
Q28F07	Protein arginine N-methyltransferase 1 OS=Xenopus tropicalis OX=8364 GN=prmt1 PE=2 SV=1
Q9JIF0	Protein arginine N-methyltransferase 1 OS=Mus musculus OX=10090 GN=Prmt1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13649	Methyltransf_25	Methyltransferase domain	Domain	Interproscan
PF13906	AA_permease_C	C-terminus of AA_permease	Domain	Interproscan
PF13520	AA_permease_2	Amino acid permease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR025799	Family	Protein arginine N-methyltransferase	Interproscan
IPR041698	Domain	Methyltransferase domain 25	Interproscan
IPR029485	Domain	Cationic amino acid transporter, C-terminal	Interproscan
IPR002293	Family	Amino acid/polyamine transporter I	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43243	INNER MEMBRANE TRANSPORTER YGJI-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000064	Molecular Function	L-ornithine transmembrane transporter activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006865	Biological Process	amino acid transport	Interproscan
GO:0015171	Molecular Function	amino acid transmembrane transporter activity	Interproscan
GO:0015181	Molecular Function	L-arginine transmembrane transporter activity	Interproscan
GO:0015189	Molecular Function	L-lysine transmembrane transporter activity	Interproscan
GO:0097638	Biological Process	L-arginine import across plasma membrane	Interproscan
GO:1903352	Biological Process	L-ornithine transmembrane transport	Interproscan
GO:0016274	Molecular Function	protein-arginine N-methyltransferase activity	Interproscan
GO:0018216	Biological Process	peptidyl-arginine methylation	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan