Detailed information of pspe_0.1.m1.41701.m1 in Pachyseris speciosa

Genomic Location: Sc0000424:31167...56798
NR annotation: CAH3125603.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q05AM5Elongator complex protein 2 OS=Danio rerio OX=7955 GN=elp2 PE=2 SV=1
Q496Z0Elongator complex protein 2 OS=Rattus norvegicus OX=10116 GN=Elp2 PE=2 SV=1
Q6IA86Elongator complex protein 2 OS=Homo sapiens OX=9606 GN=ELP2 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR037289FamilyElongator complex protein 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44111ELONGATOR COMPLEX PROTEIN 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0002098Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0033588Cellular Componentelongator holoenzyme complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11374ELP2; elongator complex protein 2-Transfer RNA biogenesisko03016deepkoala

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