Gene detail

Detailed information of pspe_0.1.m1.42141.m1 in Pachyseris speciosa

Genomic Location: Sc0000433:584298...617510
NR annotation: CAH3196693.1, unnamed protein product, partial [Porites evermanni]
Species Pachyseris speciosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

pspe_0.1.m1.42141.m1

agtttttaatGCAGTTTGCAAAGTGGCTTTCACTGAAGAATAATAATTAATTGCTTTCTGTcatttcttttatcatttttcaaAGTTACAGTTTGGATTACCTTACAGTGATGAGTATAACTATGGAGCACATTTCAGTGCTGATAGTGATCATGATGACGATAGTGGAGGTTGCAGGTCACACAAGCCAAGACAGAGGTCAAGAAGCCTGCTCAAGCCCTGGCAGATCTGTTCCTGTTGCAGAGGATGAGCTCCAGTTGCTACATGTAAATAACCACAACAGGGAAAGATTTCCTAGaGCTATTACACAGATGGAGGAGAATTTAAATGAGCTGATACAAGAATTCTCTGAAGAAAAATCCCTCAGTCACAGTCACTGCGATGGAGTTTTGAACTTTGTTTGGAATCAGATTGTGGAAGCAGCACGTGACCTCCTTAAACAGTCGCAAGAGGGCTCCCTGACCAGTTTGTACTTTTATAATCTGTCAGATATGCTGGATAGGCTGCTGTTTGAGGAATTTAGCCCTGAGGATTTCTATAATAAGTTAGAGGAAGAAGGAAGAGTGTTGGAGAAGATCCCTGACAAGGTAGACATCACCAActatgtgaaaataaagcttgggCTTCTACAAACTGAAGAGTCTAGACCAGACTCACCAGAGAAAGATGACAGCACCCCTCCAATGGTGTTTGAAAAACCAACGGAAGACAACTTTGAATACACACAACTTATCAGCAATGGAGCTTATGGAGCTGTTTACCTAGTACAGCAAGTGTTTGCTGAAAGAGACATCTTAACGTTTGCTGAGAATCCATTTGTGGTTGGAATGTGGTGCAGTTTTGAGACAAACAAGCATTTCTGTATGGTGATGGAGTATGTTGAGGGAGGCGATTGTGCTTCGCTGCTGAAGAATATGGGTCCTCTGCCTATGGATTTGGCCAGGTCATACATAGCAGAGATGCTGCTTGCTGTTGAGTATTTACACAGTTATGGAATCATACATTATGATGTCAAGCCAGACAAtcttttgattACGTCCATATGTATGGGGCACATTAAGCTGACTGATTTTGGTTTGTCGAAGGTTGGACTGATGAACAGTACCACCCATATGTACGAACATTCATTAGCCCAGGAGACAAAGCAGTTTACAGACCAGCAAGTGTTTGGCACTCCAGATTACCTGGCCCCTGAGGTGATTCTCAGGCAAGGCAATGGTAAACATGTGGACTGGTGGTCGCTTGGTATCATTCTGTACGAGTTCCTGATTGGAGTGCCTCCTTTTTATGGTGCTACACCCGAAGAACTTTTTGCTGATACTTTTAAGTGTACAATATTTAGGTACGTTTCTGAGAAGGGCCTTGTGCACAGGGATCTAGCAGCAAGGAACATTCTCATAAGACACAGTAAAAAACGCAAGATTGGTGACTTCGGTTTGATGCGAAAGTTGTACAGTGAGGTGTATGAAGgcaagaagcagaagaaactgCCAATCAAGTGGATAGCTCCTGAGTCAATCTTTGAAAAGATCTTCAGTGTCAAGAGCGAtgtATGGTCTTATGGAGTTGTCATGTGGGAAATTGGAACTCTTGGTGGCTCGCCGTACACACTGTTAAATCACACGGAGATATTGAAGCGTCTTAAGGAAGGGTACCGAATGGAAAAGCCTGACATCTGTCCAGAGTCTTTATACACCTTGATGACAAAGTGTTGGAGGGAAACTGCTCATGAACGGCCAAGCTTTGAGTATGTGGTTGAACGAGTGGAAGAGATGTTGCTGGAGAAGGTGGAATACTTTGATTTGAACAAACTGGATGAGTCAAAGGATTATTACAAGGTGCAGGATACTACGACAGCTGAAACATCAGTACACATATAGTATAGTTGGTTTGTTATTCAGTTGAATTTGAAGGCAACGGCAACCCTCCTTGATACAAAATGTAACTATGGTATTCAGTGCATGCATGCATCCTTTTAAAATGTGATTGTATAAATTAGTAATGATTGATAAAAGAGGACAAGCTTGagtaaactttgtttttaaaactgtTGCGTCAATCTATCATGACGAGGTGTAGTCGTATCCATGCAGTAAGGACACTTTAGTTCCGTGTTTGTCATATAAActttaatgttttgtttgacCCAAACACTTTCTAGACAAAGGATAAccattaatttttctttaacatcaatttaaaaacatatgCTCCATACATAATGTGGAAGCTATCGAGTGCACTGATAACTATTGTAAGATTTCCATTGTATTTCCCATGAGAGGTTTTATGTTAGTTAAAGCTTCTTTGAGGCatatctaatgaaacaaaagcaattaaagaaatGGTAACTTAATAggacactgttttcttgttactctgcC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3U214	Microtubule-associated serine/threonine-protein kinase 3 OS=Mus musculus OX=10090 GN=Mast3 PE=1 SV=3
O60307	Microtubule-associated serine/threonine-protein kinase 3 OS=Homo sapiens OX=9606 GN=MAST3 PE=1 SV=2
Q9R1L5	Microtubule-associated serine/threonine-protein kinase 1 OS=Mus musculus OX=10090 GN=Mast1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002586 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08926 all species →	DUF1908	Domain of unknown function (DUF1908)	Domain	Interproscan
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015022 all species →	Domain	Microtubule-associated serine/threonine-protein kinase, pre-PK domain	Interproscan
IPR050236 all species →	Family	Serine/threonine-protein kinases, AGC	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR023142 all species →	Homologous_superfamily	Microtubule-associated serine/threonine-protein kinase, pre-PK domain superfamily	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR020635 all species →	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24356 all species →	SERINE/THREONINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0018105 all species →	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0004713 all species →	Molecular Function	protein tyrosine kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for pspe_0.1.m1.42141.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.