Detailed information of pspe_0.1.m1.42236.m1 in Pachyseris speciosa

Genomic Location: Sc0000436:130191...138101
NR annotation: ACJ85658.1, unknown [Medicago truncatula]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P63072Ubiquitin D OS=Mus musculus OX=10090 GN=Ubd PE=1 SV=1
Q39256Polyubiquitin 8 OS=Arabidopsis thaliana OX=3702 GN=UBQ8 PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019956DomainUbiquitin domainInterproscan
IPR050158FamilyUbiquitin and ubiquitin-likeInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR000626DomainUbiquitin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10666UBIQUITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0019941Biological Processmodification-dependent protein catabolic processInterproscan
GO:0031386Molecular Functionprotein tag activityInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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