Detailed information of pspe_0.1.m1.43838.m1 in Pachyseris speciosa

Genomic Location: Sc0000472:577905...579891
NR annotation: XP_015768938.1, PREDICTED: vitrin-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q21281Transmembrane matrix receptor MUP-4 OS=Caenorhabditis elegans OX=6239 GN=mup-4 PE=1 SV=4
A6NMZ7Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 PE=1 SV=2
P13944Collagen alpha-1(XII) chain OS=Gallus gallus OX=9031 GN=COL12A1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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