Gene detail

Detailed information of pspe_0.1.m1.44042.m1 in Pachyseris speciosa

Genomic Location: Sc0000477:431327...438720
NR annotation: CAH3038933.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q20191	Zinc metalloproteinase nas-13 OS=Caenorhabditis elegans OX=6239 GN=nas-13 PE=2 SV=5
P98068	Protein SpAN OS=Strongylocentrotus purpuratus OX=7668 GN=SPAN PE=2 SV=1
Q61847	Meprin A subunit beta OS=Mus musculus OX=10090 GN=Mep1b PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan
PF01400	Astacin	Astacin (Peptidase family M12A)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR001506	Domain	Peptidase M12A	Interproscan
IPR000998	Domain	MAM domain	Interproscan
IPR006026	Domain	Peptidase, metallopeptidase	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR034035	Domain	Astacin-like metallopeptidase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10127	DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan