Detailed information of pspe_0.1.m1.44193.m1 in Pachyseris speciosa

Genomic Location: Sc0000481:329281...331456
NR annotation: KAJ7378267.1, hypothetical protein OS493_024217 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1KKR7Homeobox protein Hox-D9b OS=Takifugu rubripes OX=31033 GN=hoxd9b PE=3 SV=1
P21523Homeobox protein LOX2 (Fragment) OS=Hirudo medicinalis OX=6421 GN=LOX2 PE=2 SV=1
Q01622Homeobox protein LOX2 (Fragment) OS=Helobdella robusta OX=6412 GN=LOX2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR050394FamilyHomeobox NK-like transcription regulatorsInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24340HOMEOBOX PROTEIN NKXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan

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