Gene detail

Detailed information of pspe_0.1.m1.44801.m1 in Pachyseris speciosa

Genomic Location: Sc0000495:296225...301616
NR annotation: XP_022805988.1, ankyrin-1-like [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

pspe_0.1.m1.44801.m1

ATGGAATGTTGCATCGAGAAAATTAGGAGCTGGCTGATCCAGGACAGACTCCTTATTAATGATGATAAGACCGAGTTTATGATTATTGGAACTCGGCAGCAACTTTGTACATTGCAGGCTATGAACATCAAACTCACTCTGAAGACCCTAGCACGCAAGACCTTCTTGCGTGTGGACGCACTTTCTGGTTTTAGTCTACTACAAGCGGCTGTCTTGGAAGGGGACTATGCCACCGTATCCAAAGCGAGTACCCTTCTGGATGACTTTGTGCAAGGTATGAAGTTTGTAAAAACAACAAGCGAAGCAAGCTTTTTCCCCTGGGAATCTGCAGTTGATATTCTGTCAAGTGTGAGAGGGAGAGGGCCAGAGATCGATGATATCAGTAACCTTTACCAAGAGATGGTTGAGAATGAGGAATCGCTGAGTGAATTACATTACAGTGCAAAGAAAGACGATGGAGAAAAGGTAGTAGAACTAGTGCTGAATGACGGTGTAGATATTAATATCCCCGCAGACAATAATCTGACGCCTTTGTTGTGTGCGAGCCAGTCATCCTCTAGAAGTTTGATCAAGTCTCTCATCGATCTTGGTGCAGATGTAAATGCTCAAAGAATCGACGATGAAGTAACACCACTGTTGTTGGCGACTGGTTCAAATCACTACATGGCCACTCATCTGCTATTGGAGCATGGTGCTGATTCAGATGCTCAGGAATTTGAAAGAAAATCAGCAAAGCGAAGGTTTGTCGGTAAAAACAGCGGAAATACTGCACTTCACACAGCTGTTCGTGGAGAATTTTTGAACATTTCGCGGTTACTAATTGAATCAGGATGTAATATCAACCATCTGAACCGCAAAAGGGAAACCCCACTTCATATTACAGTTAGAAATAATAGTGAAGCTGTCGTCAAGCTCTTGCTTGATAACAAGGCGGATGTGAATATTCGAGGCCCTGGAGGAAATACAGCACTTCTCACAGCTGTTTGTGGAGGATTGCTGAACATTTCGCGCTTGCTGATTGAATCAGGATGCAAAATCAACCGGCGGAACTACAAGGATGAAACCCCACTTCATATTGCAGTCAAGAAAAATAGTGAATCTGCAGTCAAGTTCTTGGTTGATAACAAGGCGGATGTGAATATTGAAGACCTCAGAGACAATACAGCACTTCACATAGCTGCTCATGGAGGATCTTTGAACATTTTGCGGTTCTTAATTGAATCAGGGTGCAACGTCAACCAGCAGAACTGCAGTTTGGAAACCCCACTTCATGTTGCAGTGGAGAAAAATAGTGAAGTTGTCGTCAAGTTCTTGCTTGATAACAACGCTGATGTGAATATTCGAGACGATGACGGAAATACAGCCCTTCACATAGCTGTTCGTGGAGGATATTTGAACATTGTGCAGTTACTAATTGAATCAGGGTGCAACGTCAACCAGCGGAACTACAATTGGGAAACCCCACTTCATATTGCAGTCGAGAATAATACTAAAGCTGTCGTCAAGCTCTTGCTTGACAACAAGGCGAATGTGAATATTCAAGACCTTAGAGACAATACAGCACCTCACATAGCTGTACAGGGAGGATTTTTTAACATTGCGCGGTTACTAATTGAGTCAGGATGTAATGTCAACCAGCGGAACTACAATAAGGAAACTCCACTTCATATTGCAGTCGAGAATAACTGTGAAGCTGTCATCAAGTTATTGGTTGAGAACAAGGCTGATGTGAATATTGAAGACCATAGAGGAAATACAGCACTTCACAAAGCTGCTCGTGGAGGATCTTTCAACATTTTGCGGTTCCTAGTTGAATCAGGGTGCAACGTCAACCAGCAGAACCGCAATTTGGAAACACCACTTCATATTGCAGTCCAGAAAAATAGTGAAGCTGTAGTCCAGTTCTTGGTTGATAACCGAGCGGATGTGAATATTGAAGACCGTAGAGGAAATACAGCACTTCACAAAGCTGCTCGTGGAGGATCTTTCAACATTTTGCGGTTCCTAAttgaatcaggatgcaacgtcaACCTGCAGAACCGCAATTTGGAAACACCACTTCATATTGCAGTCGAGAAAAAAAGTGAACCTGTCGTCAAGCTCTTGCTTGACAACAAGGCGGATGCGAATATTCAAGACCATAGAGGAAATACAGCACTTCACAAAGCTGCTCGTGGAcgatttttgaacattttgcgGTTCCTAATTGAATCAGGGTGCAATGTCAACCTGCAGAATGGCAATTTGGAAACCCCAGTTCATATTGCAGTTGAGAAAAATAGTGAAGCTGTCGTCAAGTTCTTGCTTGACAACAAGGCGCATGTGAATATTCAAGACCATAGAGGAAATACAGCACTGCACAAAGCTGTTAATGGAAGAagatttttgaacattttgcgGTTACTTATTAAATCAGAGTGCAACGTCAACCAGCAGAACCGCAATTTGGAAACCCCACTTCATCTTGCAGTCGAGAAAAATAGCGAAGCTGTCGTCAAGTTCTTGGTTGATAACAAGGCGGATGTGGATATTCAAGACGATGAAGGAAATACAGCCCTTCACACAGCTGCTCGTGGAGGATCTTTGAACATTGCTCGGTTACTGAATGCATCAGGACAATAA

Transcript

pspe_0.1.m1.44801.m1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF13637	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24178	MOLTING PROTEIN MLT-4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0097543	Cellular Component	ciliary inversin compartment	Interproscan
GO:1904108	Biological Process	protein localization to ciliary inversin compartment	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15502	ANKRD28; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A	-	DNA repair and recombination proteins	ko03400	deepkoala