Gene detail

Detailed information of pspe_0.1.m1.44813.m1 in Pachyseris speciosa

Genomic Location: Sc0000495:594871...618111
NR annotation: CAH3164086.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

pspe_0.1.m1.44813.m1

ATGAAAACGTTAGTTGTTCTTCTTGTCTTCCTCATGACTGCTGCCGCAAAGACTCCAGCAACTCCTCGACAAGGGACATGCCCGCCCAATCTTAAGCCTCCAGCAGGGGTCTGTGCGTCTGATTCAGACGAGTGTATGTTTGATTGGGACTGCGAGGAACCGACAAAGAAATGTTGTAGTAACAACTGCTTCCAAGAATGTGTGGATCCTTCTCTGAGCGCTGCTCTCCGAGCCAAGTGTCCCGCTCGAAAGCAGTCTCCGGAGTGTCACATGGCCTATAGAAATCTGTGTTCAAATGACTCCGAATGTGATTACGTTGTGGGTGGAGTTTGCTGTTTTGATGGCTGCCGTAGACGTTGTGCTACTGCCGACAAATTTCTAGACAGACTAGAAGCCGAAAGACCAGGTCGTTGCCCAGATCTTCGTCGGCCCGAGTTCTGCGTCGCCGATGCTAATGAATGTGAGTTTGATGCGGATTGTTATCCTGGGAGGAAGTGCTGCAGTGACACGTGCATCAAACGATGCTTGGATCCACTGGTTGTAGCAGGGAACTTGAACATTACCCAAGGAGCAGCAGCTGGGAAATGTCCTACCGTTTCCCCCTCTAATCGGTGCCATATCGGTCTTGCTAATATCTGTAACAATGATGACGATTGCATCAATAGCTCCTGTTGTTTTGACGGCTGCAGGCGAAAATGCCTGGATCCTAGTGGCAAATCTGCGGGAGCACAAGGAGAACTAAAAAAAGGTACTTGCCCTTTTCTTCCGCCACCGGACGTTTGCGCTTCAGACGTGGACGAGTGTTTCATAGACTGGGACTGTGTTGGGGACCGGAAGTGCTGTTCTAATGGATGCTACAGGATTTGTGCGCCTCCTTTACGAGGGGGATCGGCAGTGGGTCAGGTGCAAGCTGAAGCAGCAGTACAATGTCCAGAGCCTGTTGCattcatttgttccttttcccgCATGAAACATGCGTGCGATCATTCCCGCGAATGCTTCACCGGCaagatttgctgttttgatgGTTGCAGACGAAGATGTGTTCCCCCTAAAGGCGCGCCAGaTACTTGTCCTAAGCCACCTGAAACCCTGGGATGTCCGATTGGACTGAGGAACATGTGTGTTGACGACGCATCATGTGTAAACGGGACTGTCTGTTGTAATGACGGATGCCGGCGGCGCTGCAAGGACCCCTCCATATTTGGCGGGAGTTTTGAGGAAGGTAAGCCTCGACGAGGAACCTGTCCGTCTGTTTTACCACCACCTGAGTTCTGTGCGTCCGATTATGATGAATGCAAATTTGATTGGGATTGCGGGGGAACAACGAAGAAATGCTGCTCAAATACGTGCTTTAACGTTTGCGTTGAACCCAGTGATGGTGTAGTTCAAGatAATTGCCCAGCTCCGCAAAAAAGACAGCAATGTCCCATAGGGCTTCGAGGCCAGTGTTCCAATCACTCTGACTGCAGCTACGTCTCGGGCGGTCTTTGCTGTTTTGATGGCTGCCGCAGACGTTGTGCTACTGCTCGCGGTTTCGAAGCCAAAATAGAAATCGCTAGGCCTGGCAAGTGTCCGATCCTGGAGCCACCCGAATTCTGCGTTGCGGATTATGACGAGTGCGAGCTTGATGGCGATTGCTATCCTGGCAAAAAGTGCTGCGGTAACACTTGCTTCAAAAGATGCgtcaatccactttttggtgATATTGGTTCTGACAAGACAGGCTCATGCCCAAACCTCCCTCCTGTGACAGGGCCTTGTCCGTCCCATGTGGACGAGTGCTTTATGGACAACGATTGcgtcaaagataaaaaatgctGCTCCAATGGATGCTACACCATTTGCGTTCCTCCGGCGGAGCGCATCCTTACGCCTGCTGCAGCAGtCAAGTGTCCTGATCCCACGCCTTATCACTGCACGAGCTCTATGGGGCCTTCGTGTGAAGACCAAAAAGACTGTCCGGGCGGCAAAGTTTGCTGCTTTGACGGATGTCGACCGAGATGCGTTAGCTCAAAAAGTGCCCAGCTGAGAGCAGGTTTGTAA

Transcript

pspe_0.1.m1.44813.m1

CATGATTTAGTAATATTCCAAATACCTCTAGGTAATTCTGTGAAGCCTCAATAGACAACGCGTCCTGGGACCAAGCTGTTTGCAAACATCAAAAGCAATTCTTACAACCGCTGAAGGATCTTGGAGGAATCATTACGGcgCAACTAACACCATGAAAACGTTAGTTGTTCTTCTTGTCTTCCTCATGACTGCTGCCGCAAAGACTCCAGCAACTCCTCGACAAGGGACATGCCCGCCCAATCTTAAGCCTCCAGCAGGGGTCTGTGCGTCTGATTCAGACGAGTGTATGTTTGATTGGGACTGCGAGGAACCGACAAAGAAATGTTGTAGTAACAACTGCTTCCAAGAATGTGTGGATCCTTCTCTGAGCGCTGCTCTCCGAGCCAAGTGTCCCGCTCGAAAGCAGTCTCCGGAGTGTCACATGGCCTATAGAAATCTGTGTTCAAATGACTCCGAATGTGATTACGTTGTGGGTGGAGTTTGCTGTTTTGATGGCTGCCGTAGACGTTGTGCTACTGCCGACAAATTTCTAGACAGACTAGAAGCCGAAAGACCAGGTCGTTGCCCAGATCTTCGTCGGCCCGAGTTCTGCGTCGCCGATGCTAATGAATGTGAGTTTGATGCGGATTGTTATCCTGGGAGGAAGTGCTGCAGTGACACGTGCATCAAACGATGCTTGGATCCACTGGTTGTAGCAGGGAACTTGAACATTACCCAAGGAGCAGCAGCTGGGAAATGTCCTACCGTTTCCCCCTCTAATCGGTGCCATATCGGTCTTGCTAATATCTGTAACAATGATGACGATTGCATCAATAGCTCCTGTTGTTTTGACGGCTGCAGGCGAAAATGCCTGGATCCTAGTGGCAAATCTGCGGGAGCACAAGGAGAACTAAAAAAAGGTACTTGCCCTTTTCTTCCGCCACCGGACGTTTGCGCTTCAGACGTGGACGAGTGTTTCATAGACTGGGACTGTGTTGGGGACCGGAAGTGCTGTTCTAATGGATGCTACAGGATTTGTGCGCCTCCTTTACGAGGGGGATCGGCAGTGGGTCAGGTGCAAGCTGAAGCAGCAGTACAATGTCCAGAGCCTGTTGCattcatttgttccttttcccgCATGAAACATGCGTGCGATCATTCCCGCGAATGCTTCACCGGCaagatttgctgttttgatgGTTGCAGACGAAGATGTGTTCCCCCTAAAGGCGCGCCAGaTACTTGTCCTAAGCCACCTGAAACCCTGGGATGTCCGATTGGACTGAGGAACATGTGTGTTGACGACGCATCATGTGTAAACGGGACTGTCTGTTGTAATGACGGATGCCGGCGGCGCTGCAAGGACCCCTCCATATTTGGCGGGAGTTTTGAGGAAGGTAAGCCTCGACGAGGAACCTGTCCGTCTGTTTTACCACCACCTGAGTTCTGTGCGTCCGATTATGATGAATGCAAATTTGATTGGGATTGCGGGGGAACAACGAAGAAATGCTGCTCAAATACGTGCTTTAACGTTTGCGTTGAACCCAGTGATGGTGTAGTTCAAGatAATTGCCCAGCTCCGCAAAAAAGACAGCAATGTCCCATAGGGCTTCGAGGCCAGTGTTCCAATCACTCTGACTGCAGCTACGTCTCGGGCGGTCTTTGCTGTTTTGATGGCTGCCGCAGACGTTGTGCTACTGCTCGCGGTTTCGAAGCCAAAATAGAAATCGCTAGGCCTGGCAAGTGTCCGATCCTGGAGCCACCCGAATTCTGCGTTGCGGATTATGACGAGTGCGAGCTTGATGGCGATTGCTATCCTGGCAAAAAGTGCTGCGGTAACACTTGCTTCAAAAGATGCgtcaatccactttttggtgATATTGGTTCTGACAAGACAGGCTCATGCCCAAACCTCCCTCCTGTGACAGGGCCTTGTCCGTCCCATGTGGACGAGTGCTTTATGGACAACGATTGcgtcaaagataaaaaatgctGCTCCAATGGATGCTACACCATTTGCGTTCCTCCGGCGGAGCGCATCCTTACGCCTGCTGCAGCAGtCAAGTGTCCTGATCCCACGCCTTATCACTGCACGAGCTCTATGGGGCCTTCGTGTGAAGACCAAAAAGACTGTCCGGGCGGCAAAGTTTGCTGCTTTGACGGATGTCGACCGAGATGCGTTAGCTCAAAAAGTGCCCAGCTGAGAGCAGGTTTGTAAAATTAa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00095	WAP	WAP-type (Whey Acidic Protein) 'four-disulfide core'	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036645	Homologous_superfamily	Elafin-like superfamily	Interproscan
IPR008197	Domain	WAP-type 'four-disulfide core' domain	Interproscan
IPR050514	Family	WAP four-disulfide core domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19441	WHEY ACDIC PROTEIN WAP	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0030414	Molecular Function	peptidase inhibitor activity	Interproscan
GO:0004867	Molecular Function	serine-type endopeptidase inhibitor activity	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan