Gene detail

Detailed information of pspe_0.1.m1.45369.m1 in Pachyseris speciosa

Genomic Location: Sc0000509:132825...142711
NR annotation: CAH3140369.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.45369.m1

TATCACACGAATTCGAAGTCCATTTTGAACAGCAAAGCGAAGAATTCGAATGTAAATTCAGTTAGAGATGCAAACTTGAAGTTCCATCTCCAACTAAAACTTGTTTGTCGTAGACCTTTTGTTATTTTCCTTAACCGATGGCAATTGTTCAGCTCTTCTGTTCCGCTGGTCCTCCTCGCAAGCGTGACAGTCTTTATTCATGGCTGGTTTGTGTTTGCGCTACAATGACCTGGGTAGCATCGCTTGGGCTTCTTTTCAGCTTCAGTGTTTTCCTGCCGGTGTTCATGGATTATTTCAAAGCATCTCGAGAGACTGCAGCATGGGTTGGTTCTCTCGCCATTGCACTGGCGTTCTTCACTGGTCATCTATCAACTGCTTTAATCATTTGGTTCGGCTGTCGTGTCACCACTTTGATCGGGGGTGCATTTTGTGTTGTAAGCTTGATAACCAGCTCCCTTGTTGAGAACATTTCGGTTCTCTTCTTCACCTACAGTCTTCTGTTCGGCTTGGGTTGCAGCTGTACATTCTCCTCAGGTCTTGTTGTAATTGGCCAATTCTTCAAGAAAAGACAGTCAATTGCCACTGGTGTGCTCCAAGCGGGGATTGGCGGAGGGATGCTTATTTTGGGCCCCACATTAGAGGCCCTAATAAGGGCTCATGGCTGGCAGACCTGTCTTCGCATAATGGCCATAGCTGCATTTGTCTTGTGCTCACTTGCAATAACCTTTGATCCCAACGTGGAGACAGATAACAAAAATAGCGCCAAAGAAAAGGAAGAGGAAGCTGCTGAATCCAGAGTAAAGAAAAAAGGTGAAACAATTGTCACAAAAATCAAGACTGTCTTTGATTTGTCAGTGTGGAAAGAGCCTGCTTTCATCGCCTTTATCATTTGCGATTTCTTGACGGAGTCTGGCTTTTTTGTTCCGCAGATTCATTTGGTTCGCTATTGTGAGGAACTGGGCCTTTCATCCGAGAGGGCATCACAGCTTCTCATTTATTATGGCTTGTGTTCAATGATTGCCCGTCTACTCGCCGGCATTTTATGCAGTCACCCAAGAGTGAGACCTTTGATTGTGTTCCAGGCCGCCGCATTTGTAAGCGGCTTGAACACGATTATAGTGACCCTAGCAAGGACATACACACCGCTAGTCATCTATGCCATAATTTATGGGTTTTGTGATGGATTCTTCTATTGTTGTTTGGGCCTCCTTCTTCTCACTGTCAATCCACCAAAAGCTGCTGCTGTGATCGGATGGAAGATGATGTTGGTGTCGTTTGCGCAGGCCAGCGGTCCTGCCTTAGCTGGTCTGATGGCAGACAAGCTGGGTTCCTATGTCGTACCATTCCGAGTGGCTGGTGGTATAACACTCAGCGGAGCTTTAATTCCGTTTTTGTTCCTTTGTTGTTCACGACGAGATCGTACTAACCTTATGctcgaagaagaagaagaaggccAAAGCCTATTGAACCACAGCTCTTAAACTAAACAAGAAAATGTCTCTTTAGACTTTGAATGTGCCGTAATTATAGTTGAAAATACTTATAAATTATAAACCTTGGCCTGGAGTTTTCTGAGGAGTTTTCACGATTCGCAAAAAGGAACATTCATGATACATACAATAAGATGTACATGGGATGCAGAGAAGGCGGGTGAGGAAATTAAAGGAATTGAAAAATGTTTACCTgaaaattgtaattgtaatGAGATCTTAGGAAAATGGAATATTAGTAGTATCCTCAAGAAAGCCATCGAtcacaaataaaatttcaaatgagtttttttcataatttatcGCAGCTCAAAATATTCGGAAGTAATCCAAAGTTATTGTCCCCAAAAGACGGTGTTACTCTCAGTTGTCAGTTCTTCGTCCTTCCAAAGAATACGCGGTTTACTTTTATAGTCATCTGGGCTTAACTACTAGGTAATTGATTAAAGAGAAATAGAGTTTTCTCTAATTTTCTAGAGTCTGGTCGTGAATAACATTTGAGTAGGAAGGGTAGCTATACGAGTCCCCTGAAAAGGACCGCGGGAGGCTAGTAACCATACTGATTGAAATATGTGTTTGGGATTGCTTGCCATGCTCCATCTGGACTGTTCAAAAGTCTGGCAATCCAACTCAAACGCAATGCTTTTACAGTTGAGTGACATTTTGGGAAATTTAATCCATCGGTTTAGTTTGTCCACCTTGTTCGGGAAGAGAAATGTAGATACTTTTTTCTGGAACTGTTTCAGGAACAGCGAGTATCGAGGCTGGATTAACCGGTTTAGATATGCCTCATACCTTAACAACACTGTACGTCCAAACAAATTAAATTTCGTGTTTTCCACTTACCTTGAATCTATCGCGAGAATTTAAATGAACAATCAAATTATATAGATTCGTTCCTAGTATTTTGATAGGTTTTTGACAAGATTGGCAATCTAGAGGTTTAGTTTTAATGTCCTATTGTTGTTTAATAGGAAGCTAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050327	Family	Proton-linked Monocarboxylate Transporter	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11360	MONOCARBOXYLATE TRANSPORTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008028	Molecular Function	monocarboxylic acid transmembrane transporter activity	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan