Detailed information of pspe_0.1.m1.45601.m1 in Pachyseris speciosa

Genomic Location: Sc0000514:327284...348832
NR annotation: CAH3115970.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P54731FAS-associated factor 1 OS=Mus musculus OX=10090 GN=Faf1 PE=1 SV=2
Q9UNN5FAS-associated factor 1 OS=Homo sapiens OX=9606 GN=FAF1 PE=1 SV=2
Q924K2FAS-associated factor 1 OS=Rattus norvegicus OX=10116 GN=Faf1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD|UBX

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14555UBA_4UBA-like domainDomainInterproscan
PF21021FAF1Fas-associated factor 1DomainInterproscan
PF00789UBXUBX domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050730FamilyUBX domain-containing proteinInterproscan
IPR001012DomainUBX domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR049483DomainFas-associated factor 1/2-like, UAS domainInterproscan
IPR006577DomainUASInterproscan
IPR044541DomainFAF1, UBA-like domainInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR033043DomainFAS-associated factor 1-like, UBX domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23322FAS-ASSOCIATED PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0030433Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20703FAF1; FAS-associated factor 1-Toll and Imd signaling pathwayko04624deepkoala

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