Detailed information of pspe_0.1.m1.45742.m1 in Pachyseris speciosa

Genomic Location: Sc0000517:490707...518456
NR annotation: CAH3021181.1, unnamed protein product, partial [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B3EWZ6MAM and LDL-receptor class A domain-containing protein 2 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
B3EWZ5MAM and LDL-receptor class A domain-containing protein 1 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
Q8QFX6Neuropilin-1a OS=Danio rerio OX=7955 GN=nrp1a PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00431CUBCUB domainDomainInterproscan
PF00354PentaxinPentaxin familyDomainInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051560FamilyMAM domain-containing proteinInterproscan
IPR000998DomainMAM domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR000859DomainCUB domainInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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