Detailed information of pspe_0.1.m1.47424.m1 in Pachyseris speciosa

Genomic Location: Sc0000560:23529...29925
NR annotation: XP_020603893.1, synaptonemal complex protein 3-like isoform X2 [Orbicella faveolata]
Species Pachyseris speciosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4R764Synaptonemal complex protein 3 OS=Macaca fascicularis OX=9541 GN=SYCP3 PE=2 SV=1
Q8IZU3Synaptonemal complex protein 3 OS=Homo sapiens OX=9606 GN=SYCP3 PE=1 SV=1
Q3T0E2Synaptonemal complex protein 3 OS=Bos taurus OX=9913 GN=SYCP3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005997 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04803
all species →		Cor1Cor1/Xlr/Xmr conserved regionCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051443
all species →		FamilyX-linked Lymphocyte-regulated/Synaptonemal Complex Protein 3Interproscan
IPR006888
all species →		DomainXLR/SYCP3/FAM9 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19368
all species →		XLR/SCP3/FAM9Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000795
all species →		Cellular Componentsynaptonemal complexInterproscan
GO:0007286
all species →		Biological Processspermatid developmentInterproscan
GO:0051321
all species →		Biological Processmeiotic cell cycleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for pspe_0.1.m1.47424.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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