Detailed information of pspe_0.1.m1.47953.m1 in Pachyseris speciosa

Genomic Location: Sc0000572:26846...55384
NR annotation: CAH3173898.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q14191Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Homo sapiens OX=9606 GN=WRN PE=1 SV=2
O93530Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Xenopus laevis OX=8355 GN=wrn PE=1 SV=1
O09053Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Mus musculus OX=10090 GN=Wrn PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16124RecQ_Zn_bindRecQ zinc-bindingDomainInterproscan
PF14493HTH_40Helix-turn-helix domainDomainInterproscan
PF09382RQCRQC domainDomainInterproscan
PF00570HRDCHRDC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032284DomainATP-dependent DNA helicase RecQ, zinc-binding domainInterproscan
IPR002121DomainHRDC domainInterproscan
IPR029491DomainHelicase Helix-turn-helix domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR044876Homologous_superfamilyHRDC domain superfamilyInterproscan
IPR018982DomainRQC domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR010997Homologous_superfamilyHRDC-like superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
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 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0044237Biological Processobsolete cellular metabolic processInterproscan

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