Detailed information of pspe_0.1.m1.48787.m1 in Pachyseris speciosa

Genomic Location: Sc0000593:507784...517192
NR annotation: CAH3042799.1, unnamed protein product, partial [Porites lobata]
Species Pachyseris speciosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010049 (this species only)

 Pfam domain
No Pfam domain signature was detected for pspe_0.1.m1.48787.m1. This gene does have a gene model — the search simply returned no hit.
 InterPro
No InterPro signature was detected for pspe_0.1.m1.48787.m1. This gene does have a gene model — the search simply returned no hit.
 PANTHER
PANTHER termDescriptionSource
PTHR23139
all species →		RNA-BINDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000243
all species →		Cellular Componentcommitment complexInterproscan
GO:0008187
all species →		Molecular Functionpoly-pyrimidine tract bindingInterproscan
GO:0016607
all species →		Cellular Componentnuclear speckInterproscan
GO:0030628
all species →		Molecular Functionpre-mRNA 3'-splice site bindingInterproscan
GO:0071004
all species →		Cellular ComponentU2-type prespliceosomeInterproscan
GO:0089701
all species →		Cellular ComponentU2AF complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for pspe_0.1.m1.48787.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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