Gene detail

Detailed information of pspe_0.1.m1.48801.m1 in Pachyseris speciosa

Genomic Location: Sc0000594:151787...168016
NR annotation: XP_020618556.1, leucine--tRNA ligase, cytoplasmic-like isoform X1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5R614	Leucine--tRNA ligase, cytoplasmic OS=Pongo abelii OX=9601 GN=LARS1 PE=2 SV=1
Q9P2J5	Leucine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=LARS1 PE=1 SV=2
Q8BMJ2	Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00133	tRNA-synt_1	tRNA synthetases class I (I, L, M and V)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009008	Homologous_superfamily	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR004493	Family	Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic	Interproscan
IPR002300	Domain	Aminoacyl-tRNA synthetase, class Ia	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45794	LEUCYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0002161	Molecular Function	aminoacyl-tRNA editing activity	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004823	Molecular Function	leucine-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006429	Biological Process	leucyl-tRNA aminoacylation	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00255	ACADL; long-chain-acyl-CoA dehydrogenase	EC:1.3.8.8	PPAR signaling pathway	ko03320	deepkoala