Detailed information of pspe_0.1.m1.48814.m1 in Pachyseris speciosa

Genomic Location: Sc0000594:194338...202985
NR annotation: KAJ7377119.1, Leucine--tRNA ligase, cytoplasmic [Desmophyllum pertusum]
Species Pachyseris speciosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5R614Leucine--tRNA ligase, cytoplasmic OS=Pongo abelii OX=9601 GN=LARS1 PE=2 SV=1
Q9P2J5Leucine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=LARS1 PE=1 SV=2
Q8BMJ2Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002125 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08264
all species →		Anticodon_1Anticodon-binding domain of tRNA ligaseDomainInterproscan
PF09334
all species →		tRNA-synt_1gtRNA synthetases class I (M)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004493
all species →		FamilyLeucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolicInterproscan
IPR013155
all species →		DomainMethionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-bindingInterproscan
IPR009080
all species →		Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR014729
all species →		Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR015413
all species →		DomainMethionyl/Leucyl tRNA synthetaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45794
all species →		LEUCYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004823
all species →		Molecular Functionleucine-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006429
all species →		Biological Processleucyl-tRNA aminoacylationInterproscan
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418
all species →		Biological ProcesstRNA aminoacylation for protein translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for pspe_0.1.m1.48814.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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