Gene detail

Detailed information of pspe_0.1.m1.48972.m1 in Pachyseris speciosa

Genomic Location: Sc0000598:88490...105315
NR annotation: CAH3034225.1, unnamed protein product [Porites lobata]
Species Pachyseris speciosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

pspe_0.1.m1.48972.m1

ATGGCAAATGGATGTGTTATTTTCAGTGCGATTGTCATTTCTTCCATCGCCTTCCTTGTAGGGTTGTACTACAACCAACTTATTCCCGAGGGACTTCCCGATGATCAGCATTTTGGTGCTCGGCTGTACGGCTTTAGCTGCGACATAGGTTTTTTCTTGGGGCATGCAGCTTCACTAGTTGGCATTGGTGATTCTCCTATTGAAAATGTGAATCAACTGCTTCATCTGTGGCTACCATTTATAAAGCAAGAGGAGGATCAGTCATGGAAAATTCAGGACACCAAGATATCTAACGTTCCTGTTCGGATTTACAAACCAGCAAATCTTGATTCTAGAAAAAGAATCACAGGCGTTGTTTTTATTCATGGTGGAGGATGGACAATTGGCACTGTTGCCCTGTATCACCCATTAACTTACCAGTTGGCTAGAGAGGCTGATGTGGTTgtgatatctgttgaTTACAGATTGGCACCTAAGAACACCTTTCCTGTGCAGTTTCATGACTGTTATGCTGTCGCTAACACAGTACTTACCAATGGTGATAAATATGGCATTGATAAAAGCCGTGTTGCTGTAGCGGGTGATAGCGCAGGAGGTAACTTAGCAGCAGCAGTTGCCCTGAAGTTAAgagatgaaaacaaaaaattagcTGCTCAGATTCTTTTGTACCCTGTACTGCAGTTCATGGACTTTTCTCTTCCCTCAACGAAATACAAGAATTCAGCATTTCTCACCAGAGAATTATTAGCAGGCTATTGGTCATATTACATGACAGGAACTCTGGACATGGTTTCCTCATTTCTAGTGAACAATCATTCTATGCATCTTCACAACACCAAGTATTTTTCTTACATTGGAGTTGAAAGCAAGGAAGAAGGTAAAGTTCAGAGGAAGCCACTGGATGGAATCCCAAAAGTTGTTCTTGATGGTCTGACTGATTACCGTGCATCACCGCTGATGGCAGATAACCtaaagggtttacctaaaacattaTTGGTGACCTGTGAATTTGATATTCTTAAAGATGAGGGGTTGTACTACAAGCAAGGTCTACCTGAGGAACTGCCAGATGAGCAAAAATTGAGTGCTCGATTGTTTGGTGTGAGTTGGGACATTTTTAGCTTCGTGGGTTATGTTGCTTCATTAGTTGGTATTGGTGATTCACCCCCAGAAAACTTGAATAGCTTATTACATCTGTGGCTGGCATTGATACCATCAGAATTAAAAGGTGATCCATCAGACAACAAATGGATGGACATCAAGGACACTCAGATTGCCAATGTTCCTGTCCGTGTTTACACACCGTTACATCTTTTAAATGACACTGCCAAGAAATCAACTGGTGTAGTTTATTTGCATGGTGGAGGGTGGCTGCTCGGATCTGTTGAACTGTTCCATCCACTGGTTTATATGTATGCTAAAGAAAGTGATGTTGTgtggatatctgttgaTTACAGATTGTCACCTAAACATACCTTCCCTGACCAGTTTGATGACTGCTTTGGTGTTGTTAGAACCCTTTTAGCCACCGCTGCTAAGTATGGCATTAATAGTAACAGGATTGTTGTTGCTGGGGACAGTGCAGGAGGTAATTTAGCTGCAGCAATTGCTCTGAAGCTTAGAGATGAAAATAAAAGACTCGCTGCTCAGATTCTTATATATCCTGCAATGCAGTTTATGGACTTTTCCCTTCCCTCATTTATGAAGATGAGCTCTCTAACTGCAACAAGACATCAAGTGGCAGTTTACTGGTCATACTATATGACAGGAACTCCGAACATGGCCAATGCCTTTCTGGTTAACAACCATTCAGTACATCTTCGTAACACTAAGTACATTTCATACATTGGAGCAAAAGACAATGAGCAACATAAAGGTCAAAGAAAGCCACTGGATGGAATTCCCAAAGCTGTTCTTGATGGCCTGACTGATTACAGAGCATCACCTCTGATGGCAGACAACATGCAGGGACTGCCTAAAACACTCTTGCTAACATGCGAATATGATGTTGTTAAAGATGATGGTGTGCTGTACAAGGCACGTTTGCAGAGTGCAGGTGTTGAAGTGACCCATTTAAATTACATGGTGATCCATGGTTTTATGTCATTGCAGGCTTCAGATTACTTGGTAACAGAAGAGTTTCGACAGGCATTTCAAGATATTGTTGATTAA

Transcript

pspe_0.1.m1.48972.m1

GCGTGACAAGCAGGTGAATGAGCAGATATCCACACAGGCATGGCAAATGGATGTGTTATTTTCAGTGCGATTGTCATTTCTTCCATCGCCTTCCTTGTAGGGTTGTACTACAACCAACTTATTCCCGAGGGACTTCCCGATGATCAGCATTTTGGTGCTCGGCTGTACGGCTTTAGCTGCGACATAGGTTTTTTCTTGGGGCATGCAGCTTCACTAGTTGGCATTGGTGATTCTCCTATTGAAAATGTGAATCAACTGCTTCATCTGTGGCTACCATTTATAAAGCAAGAGGAGGATCAGTCATGGAAAATTCAGGACACCAAGATATCTAACGTTCCTGTTCGGATTTACAAACCAGCAAATCTTGATTCTAGAAAAAGAATCACAGGCGTTGTTTTTATTCATGGTGGAGGATGGACAATTGGCACTGTTGCCCTGTATCACCCATTAACTTACCAGTTGGCTAGAGAGGCTGATGTGGTTgtgatatctgttgaTTACAGATTGGCACCTAAGAACACCTTTCCTGTGCAGTTTCATGACTGTTATGCTGTCGCTAACACAGTACTTACCAATGGTGATAAATATGGCATTGATAAAAGCCGTGTTGCTGTAGCGGGTGATAGCGCAGGAGGTAACTTAGCAGCAGCAGTTGCCCTGAAGTTAAgagatgaaaacaaaaaattagcTGCTCAGATTCTTTTGTACCCTGTACTGCAGTTCATGGACTTTTCTCTTCCCTCAACGAAATACAAGAATTCAGCATTTCTCACCAGAGAATTATTAGCAGGCTATTGGTCATATTACATGACAGGAACTCTGGACATGGTTTCCTCATTTCTAGTGAACAATCATTCTATGCATCTTCACAACACCAAGTATTTTTCTTACATTGGAGTTGAAAGCAAGGAAGAAGGTAAAGTTCAGAGGAAGCCACTGGATGGAATCCCAAAAGTTGTTCTTGATGGTCTGACTGATTACCGTGCATCACCGCTGATGGCAGATAACCtaaagggtttacctaaaacattaTTGGTGACCTGTGAATTTGATATTCTTAAAGATGAGGGGTTGTACTACAAGCAAGGTCTACCTGAGGAACTGCCAGATGAGCAAAAATTGAGTGCTCGATTGTTTGGTGTGAGTTGGGACATTTTTAGCTTCGTGGGTTATGTTGCTTCATTAGTTGGTATTGGTGATTCACCCCCAGAAAACTTGAATAGCTTATTACATCTGTGGCTGGCATTGATACCATCAGAATTAAAAGGTGATCCATCAGACAACAAATGGATGGACATCAAGGACACTCAGATTGCCAATGTTCCTGTCCGTGTTTACACACCGTTACATCTTTTAAATGACACTGCCAAGAAATCAACTGGTGTAGTTTATTTGCATGGTGGAGGGTGGCTGCTCGGATCTGTTGAACTGTTCCATCCACTGGTTTATATGTATGCTAAAGAAAGTGATGTTGTgtggatatctgttgaTTACAGATTGTCACCTAAACATACCTTCCCTGACCAGTTTGATGACTGCTTTGGTGTTGTTAGAACCCTTTTAGCCACCGCTGCTAAGTATGGCATTAATAGTAACAGGATTGTTGTTGCTGGGGACAGTGCAGGAGGTAATTTAGCTGCAGCAATTGCTCTGAAGCTTAGAGATGAAAATAAAAGACTCGCTGCTCAGATTCTTATATATCCTGCAATGCAGTTTATGGACTTTTCCCTTCCCTCATTTATGAAGATGAGCTCTCTAACTGCAACAAGACATCAAGTGGCAGTTTACTGGTCATACTATATGACAGGAACTCCGAACATGGCCAATGCCTTTCTGGTTAACAACCATTCAGTACATCTTCGTAACACTAAGTACATTTCATACATTGGAGCAAAAGACAATGAGCAACATAAAGGTCAAAGAAAGCCACTGGATGGAATTCCCAAAGCTGTTCTTGATGGCCTGACTGATTACAGAGCATCACCTCTGATGGCAGACAACATGCAGGGACTGCCTAAAACACTCTTGCTAACATGCGAATATGATGTTGTTAAAGATGATGGTGTGCTGTACAAGGCACGTTTGCAGAGTGCAGGTGTTGAAGTGACCCATTTAAATTACATGGTGATCCATGGTTTTATGTCATTGCAGGCTTCAGATTACTTGGTAACAGAAGAGTTTCGACAGGCATTTCAAGATATTGTTGATTAAATTAAGGAGTTGTAAAACAGCGCTGATGGTGATTGATCACCTTTGGAATCTCACAGCTGAGAGACAACACCAGTGTAACGGTTACACTGTTTCAGGGGTGGCAAATAATTTGTCTGTCTCTGATTGATACCTTCTTTTTGCAAGACTAAGACAGTATCAGACTTGCGCGATCTTCTAGAAAAGAAGACTTCTCTTGTGTCCTCTTAAATTTCAATCCTTGTGACAACATGGGGATCACACTTGTgatgggtggggg

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7M370	Arylacetamide deacetylase OS=Oryctolagus cuniculus OX=9986 GN=AADAC PE=1 SV=1
Q0P5B7	Arylacetamide deacetylase OS=Bos taurus OX=9913 GN=AADAC PE=2 SV=1
P22760	Arylacetamide deacetylase OS=Homo sapiens OX=9606 GN=AADAC PE=1 SV=5

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001675 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07859 all species →	Abhydrolase_3	alpha/beta hydrolase fold	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR050300 all species →	Family	'GDXG' lipolytic enzyme	Interproscan
IPR033140 all species →	Active_site	Lipase, GDXG, putative serine active site	Interproscan
IPR013094 all species →	Domain	Alpha/beta hydrolase fold-3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48081 all species →	AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016298 all species →	Molecular Function	lipase activity	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13616	AADAC; arylacetamide deacetylase	EC:3.1.1.3	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.