Gene detail

Detailed information of pspe_0.1.m1.49003.m1 in Pachyseris speciosa

Genomic Location: Sc0000598:391138...394522
NR annotation: XP_029184499.2, probable E3 ubiquitin-protein ligase RNF144A-B [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|RBR

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01485	IBR	IBR domain, a half RING-finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002867	Domain	IBR domain	Interproscan
IPR044066	Domain	TRIAD supradomain	Interproscan
IPR051628	Family	Linear Ubiquitination-Associated E3 Ligases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22770	UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0000151	Cellular Component	ubiquitin ligase complex	Interproscan
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0071797	Cellular Component	LUBAC complex	Interproscan
GO:0097039	Biological Process	protein linear polyubiquitination	Interproscan