Gene detail

Detailed information of pspe_0.1.m1.49169.m1 in Pachyseris speciosa

Genomic Location: Sc0000602:433694...445638
NR annotation: KAJ7388801.1, hypothetical protein OS493_035585 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.49169.m1

AAAGTGAAGTGAAGCGACCAGGAATCAATCGATAATTCATCGAATTCGGCCGTTGCTCGGCTGTTTTCCGCTCGATGTATACACCTGAACAATCGTAAACGATCGTAAACAATACCGGTAATAAGGGCAATATACATTAATGCTTCCTCAATGTCATTCATGAAAATTCTTGCTTTGAGAAGACCATGAGAGCGTTGTGGATGGTGTTGACATTTTGGGTTTTCTCTCCTCTGGAGTCTAAACATCCACCCGGTCATTTACAGCCTTTAGGATCACACCAGCCTCCCGTGGGTTCCATACCGAGTACAGCTGTGGTGCCGAGTGCGAAAGACTTCTTCGAGCAAAATGCTTTACCCGGAGAACCTTTGGTTCTCAAAGGAGCGGCAAAGAAAATGCCGGCTTATTCAAAATGGACTGATGATTATTTAAGTCAGAAGTTTGGAGAAGAAAGTATTGATGTTGAAGAAGGTAAAAAAGAGAACAGATCTCTAGCTACATTTCATTTCAAGTTACAAGACTTTATCTCACGTTACAAGAATGAAGACATATATTTGGTGGAGTCACTCCCAATGAAAATGAGAGAGGAGTATGCTTTGCTAAAGAGCTTGAGTTGTGGTGGTTATACCAATGTCCTTCAAGATGCAGTAGTGTGGTTTAGCAGCGGAGGAACCAAGTCTGTGCTTCACTTTGATGGGGTAGATAACATTAACTGTCTCTTTGATGGAACAAAAGAGCTACTCATGATTAACAAGTCTCATCTCGAGCAAGCACACATTGATATGATTGAAGGAGCTTTCTCATCTGTGGATGTGGATAGTGTTGACATGTATAAATTTCCAGGACTTCAAACCATCCCCTATTATAAGGTTTTCATGGAAGCAGGCGACTGTTTATTTATTCCCTCTAGGTAACTTTACCAAGTCAGTTATCAGATGGGTTCATCAGGTGCGGTCATATGGCACACGGAACCTTGCTGTCAATATTTGGTGGGCCCACTTCATTAACTTCAACCATACAGATTGTGCACAGAGCCCTTATAAAGACAAAGAGTTAATACCACTAAGTCTGTTTGACTTACATCCACATGAGACAATAAGGCATGCAACTCTACAAGCCCTTGGTGGAAAACCAGTTAACTTGGAGCAGTGGATTGAACTTATGGAGACAGAGGCTGCTCCACCTGGCCAAGTATTACCAAAAGAGATATTAGAACAGTATTTCCATGAAATCGATGCAAACAGAGATGGCTATGTGAGTCCCGAGGAGATTTATGGTGTAAATTATGATGACATTGAGCGGCTGCTAGGGGGCACAGAactagaagaagaagaaggagaaggagaaggagaggATGTTGACAGTTTAGATTCAACAGAGGATGAGAACACTCAGCCTGAAGATTCACAAAGTGAAAGCACGGATGAGGAGCACACAGTTCACGACTCTGACCGTAAACACACTGAACTTTGAACTTTGCAATTTATGAATAAGACTTTTTAAATGGAGTAGAAGATGTAGAAACaaaattttaccacaattgcaattaatctcgcaatctgattggctaatttgccgttgtcgataagagtctagacaacgctgcttgCGTCAACGTGtcattcgtcatcacagtggtcaaaatttgttaaacatcattttgaccactgtgataacgaatatcgttgtcgataagagtacagacaatgctaaaccacattctgTGTTAAATGAATCCATGGAAGTCACGAAGATGAATAGAAAGTTACAACTGGACATCATAATAAATTATTCCAACTTATGTTAGAAATTAGTTCACAGTGCCAATTTTTCAGGGGTGTGGGATTTTGGATGGACATTTCTTTCACTGTGGACATTATTTCTTAAGGGAGCATGCTAATTTAATTTCAACAAAAAATACCAAAAGTTACAAAGCTGTCAATATTTTGCAAACATTAAGGtattgataaacacattttattttaagtAGATTGTATTTAAATGGGAAAGCTCAACTCATTGCGGTGGTTTTTGAAGAAGTATACGCTTAATAGAGCTTTGGAAACATGAAggcataaaattaaaattaaataaatcctGTACACATTGTTCACgaattttttgtaatttattttctgagcgaacaaaataataattataataacttgAGTAACG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13621	Cupin_8	Cupin-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003347	Domain	JmjC domain	Interproscan
IPR041667	Domain	Cupin-like domain 8	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12461	HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016706	Molecular Function	2-oxoglutarate-dependent dioxygenase activity	Interproscan