Gene detail

Detailed information of pspe_0.1.m1.50345.m1 in Pachyseris speciosa

Genomic Location: Sc0000635:405894...412261
NR annotation: KAJ7379334.1, THO complex subunit 7 [Desmophyllum pertusum]
Species abbreviation PSPEC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7RX34	THO complex subunit 7 homolog OS=Nematostella vectensis OX=45351 GN=thoc7 PE=3 SV=1
Q3SZ60	THO complex subunit 7 homolog OS=Bos taurus OX=9913 GN=THOC7 PE=2 SV=1
Q6I9Y2	THO complex subunit 7 OS=Homo sapiens OX=9606 GN=THOC7 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005353 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05615 all species →	THOC7	Tho complex subunit 7	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008501 all species →	Family	THO complex subunit 7/Mft1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23405 all species →	MAINTENANCE OF KILLER 16 MAK16 PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000445 all species →	Cellular Component	THO complex part of transcription export complex	Interproscan
GO:0006406 all species →	Biological Process	mRNA export from nucleus	Interproscan
GO:0006397 all species →	Biological Process	mRNA processing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13176	THOC7; THO complex subunit 7	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.