Detailed information of pspe_0.1.m1.50951.m1 in Pachyseris speciosa

Genomic Location: Sc0000652:474138...492789
NR annotation: CAH3163704.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9NS91E3 ubiquitin-protein ligase RAD18 OS=Homo sapiens OX=9606 GN=RAD18 PE=1 SV=2
Q9QXK2E3 ubiquitin-protein ligase RAD18 OS=Mus musculus OX=10090 GN=Rad18 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|UBZ

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
----------

 InterPro
InterPro termTypeDescriptionSource
IPR006642DomainRad18, zinc finger UBZ4-typeInterproscan
IPR039577FamilyE3 ubiquitin-protein ligase Rad18Interproscan
IPR003034DomainSAP domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14134E3 UBIQUITIN-PROTEIN LIGASE RAD18Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006301Biological Processpostreplication repairInterproscan
GO:0006513Biological Processprotein monoubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0097505Cellular ComponentRad6-Rad18 complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10627RAD18; E3 ubiquitin-protein ligase RAD18EC:2.3.2.27
DNA repair and recombination proteinsko03400deepkoala

TOP