Detailed information of pspe_0.1.m1.51440.m1 in Pachyseris speciosa

Genomic Location: Sc0000667:482458...490855
NR annotation: CAH3039086.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q862Z3Uromodulin OS=Canis lupus familiaris OX=9615 GN=UMOD PE=2 SV=1
Q6UXI9Nephronectin OS=Homo sapiens OX=9606 GN=NPNT PE=1 SV=3
Q5RBP1Nephronectin OS=Pongo abelii OX=9601 GN=NPNT PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961DomainFibronectin type IIIInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR000483DomainCysteine-rich flanking region, C-terminalInterproscan
IPR050328FamilyMultifunctional Developmental and Immune ReceptorInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24373SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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