Gene detail

Detailed information of pspe_0.1.m1.51461.m1 in Pachyseris speciosa

Genomic Location: Sc0000668:368268...377228
NR annotation: XP_027055543.1, uncharacterized protein LOC113682579 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.51461.m1

CGGGCGCCTAGACATCCCACTGCTTTTGTTTTGCCCAGTAAAAACGGGCTCGAATTAGCATGAATATTTACCGGAAAAGAAAAGTTATTAGAAGAGAAAGGTTGCTACTAATCTTTTTGTCGCCATTGTGGTTTCCATGATGAATTTTCTTCCTCTTCTCAGTTACTTTTTTCTACTTCTGTGTTCATCAAGTCAGACAGGGTCAAAGTTGAAACGCGCATTTCGAGATGGCGACAAATGTGTGTTCGTCTTCGATGAACTTTTCCCGGGAAAAGTTATTGACTCGTTTTTCTCCGTTGTGACTTTTGGAAAAGTCAGAGGCAAGATTTCGTCGTGGTTTTACACTTACAGTGATTATTACCAAGACTTTCGCACGCTAAATACGTCGAGCAATTCTCCGTGGATAGCTCCTGTGGACCCAGAGTTTTTTACGAGCACAGCTTTGTGGAATATCAGCCGTAGAGTTATTGAAAGACTCGCTGGGGATAAAGTTTATTTCCCCTACGATGTGTCTTTCTCCATGCACCGGAGACTGGATTTTATAACTGCGTCTAGTAAAGAAAGTGATTCTCACAAGGATGATCTTGTGGTCAGAATATCTCTAAATAAAGACTTCAAGAAGAATGATTATGGAGAGGCAATTTTTTACAAAGACAGTGGAGAAATTCTTGCTGCTGTGTATCCTAAAATAGGACGGATGGTTGTATGGAATGCTTCAGTCCCATTCATCTTCAAGCCCCCTGCTATGTCATATGTACAAGCTCAGTATGACATTGTGGTAAGACTGTCAACTTCAAAGTTGAAGGCTGAACAGAAGATCATGGAAACAAAGAAATTAATTGAAAACTCTGAGAAGCAGAGTACTCTGGGATTTGCTTTGTCAGACGAGGGTGATATCCCTGCCGTGGATTTCAGCAAATATGAAAAAAGAAGATTTCATGACAGTCAGGGACGGGAAATTGCTGTGTTTGATGGCTTGGTGGATGCTGCTGACCTTGACGCCTTGAGGCTCTTCTTGCTGCAGTATAACAGTGTTTTTCAGTACCAGGGATATGATGGTCAAGATGAGGAGCATGACAATGTGTCCTGGATTGCTATGTTGAAGGTGAAGGATTTTGTCACCAGTCGACTGTGGAAGCTTGTGAAACGACTGGCGACTTACCTGAGTGGTCTTGATGAGTGGTATCCATATGATGTATCCATGAACATTATCAGGAATTCACATTATCCCAGGATTCATGAGGATTGTGACCCCCGTGAGCATGAATACACGTTCTTGCTGTACCTTACACCAGATTGGAAGGCAAATAATTATGGCGAAACAGTGTTTTATGAAGAGATTTTCCAGAAAGATGGTCACCCCTTCCCTGCAGGTAAACAGCAGTATGAGTGGGTAGCATCAGTGCGTCCAAGGTACGGCAGAATTGTCATATTCAGAGGTATCATTCCACACTCTGCCAGGCCACCCAGCCCAGGGTTCAGTGGAGCTCGTTATACATTTGCCTGTAAGGTTTCGCGTAATTATCGTCTAGCAATATCCAAGGCCTTACGAGAGACATTGGAATATCTGGACGGTGGGAATGTTGATGATCCAGAGGCTTTCGAGCTACTAGATGAGTTGACGAGTGACGAAGACGGAAAACCTATCTGGCCAATTGAGTTCATTGAGGAACAGCTGAAAAAATACCGACAAAAGAGAGAGGAATTGGGCGACAGCATGAAGAGGACGGCCATTGAGCAACTAACCACGTTCAAAGGGCTTGTCAAGGATGAACTTTAATTATTTGTGCCCCAATGTAGAATAATTATTTAATAGCTGTGGTTTCATTaatggtaatttattcagtCATCCTCCAAAAAGAGAATAAGCAGctgtaaatttattttttcaggATACAATATTATGGAAATATATGTAAAACAGGGACAGTAAAAGGACTTCATGTAACATGTCATCAGGAGTACTTTATTGCTTAAGAGCTGTACTTGTTGTTAAAAATTGAACTCCACAGCGAGCTATTAGTTATATGTTTGTTGTAATAAAATCATCGTAAACTTTTGTTCGCTGAGGAGAACCTATTTTGCAAAGTGCCATCTGGAATAAAGTAGagaaagtttgtttaatttaacttaacttcactttatttgcacttaaattttgaaattacaatagcatataaaagggaaaaaagaaatacatgtatagcaattaaaggtgacagtggtgtatagtttgtgcatggaggCTAATAGAACCACGAGGTTATCGAgttcagatgccacgcacctctcagtaacctcttaattcattggttcttattaccacgcagctccattatttcagggctagggtccattgtttctgttgtttgtttattgttttctcagccaatcctgtgagctgttccgagagctgcgtggcgcctcatcgagttagcctccatctcgtttgagtgaacATAAAAAAACATGGGAGTAGAGGGACGGACTACTAAAGGAAAGGACTAGAAGAATTGTGGAACTTGCTGAGATAGAAGATAGTTTTCAAcactttttatttgtttgtttgtttgtttgtttgttttttattgagCATCAATTGAGAGAGACTTTCCAAAAGAAAGCATCGGTGCTGACACTTGGTGGCAGATAAAAAAACTTCCAAAATGAGGACTTAAGGTTTTCAGCACAAGGCCTCTTAAGGGAGCTGAAATCAATTCAGAGAAAAAAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13640	2OG-FeII_Oxy_3	2OG-Fe(II) oxygenase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005123	Domain	Oxoglutarate/iron-dependent dioxygenase	Interproscan
IPR044862	Domain	Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain	Interproscan
IPR006620	Domain	Prolyl 4-hydroxylase, alpha subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR35169	FE2OG DIOXYGENASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0031418	Molecular Function	L-ascorbic acid binding	Interproscan