Detailed information of pspe_0.1.m1.51487.m1 in Pachyseris speciosa

Genomic Location: Sc0000669:236143...250457
NR annotation: CAH3120490.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0BUQ2Elongation factor Tu OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) OX=391165 GN=tuf PE=3 SV=1
A8HTW6Elongation factor Tu OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571) OX=438753 GN=tuf1 PE=3 SV=1
A8LLG2Elongation factor Tu OS=Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12) OX=398580 GN=tuf1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF03143GTP_EFTU_D3Elongation factor Tu C-terminal domainDomainInterproscan
PF03144GTP_EFTU_D2Elongation factor Tu domain 2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031157Conserved_siteTr-type G domain, conserved siteInterproscan
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR004541FamilyTranslation elongation factor EFTu/EF1A, bacterial/organelleInterproscan
IPR050055FamilyElongation factor Tu GTPaseInterproscan
IPR004160DomainTranslation elongation factor EFTu/EF1A, C-terminalInterproscan
IPR004161DomainTranslation elongation factor EFTu-like, domain 2Interproscan
IPR009001Homologous_superfamilyTranslation elongation factor EF1A/initiation factor IF2gamma, C-terminalInterproscan
IPR033720DomainElongation factor Tu, domain 2Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041709DomainElongation factor Tu (EF-Tu), GTP-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43721ELONGATION FACTOR TU-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003746Molecular Functiontranslation elongation factor activityInterproscan
GO:0006414Biological Processtranslational elongationInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0070125Biological Processmitochondrial translational elongationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02358tuf, TUFM; elongation factor Tu-Exosomeko04147deepkoala

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