Gene detail

Detailed information of pspe_0.1.m1.51700.m1 in Pachyseris speciosa

Genomic Location: Sc0000675:335505...338731
NR annotation: KAJ7384420.1, hypothetical protein OS493_021832 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.51700.m1

ggatcggcgtgcactattgagttatggatgcacttgggaggtatgctaagcactcaagaagctagagtcgctctctGCTATGCCTCGAgtgactcttacgcttctctcgtgcttagcaatccCCCGCGTgcaccataactcaatagtgcacgccgatccgtttaccatttgttaaataGAGCTTCAGAAGGAAGACTAGAGTAATACCCGGACAGGCTTTTACAAAGTAGCCTCCCTTTTATTAAACTGGTTGCTACGTGGCTGAAATGTTGACTAAGCCCTTTCATGTCCTTTCTCGTAGATCTTCCAGAAATTTCAAATGAGGAGAGCAGTTATGCACAAGAGATCCTCGGCAGACGGAGATCACAGAGACGCACGGGTAGACTGGTGTCGGTGAATAAACAGAAGATTGCACTGTTCAAGTACAAGGGAATTGTGTACGCTGTGGACGAAACTTGTCCTCATATGGGTGGACCCCTTCATCTTGGGGATATTGAAGAGCTTGGTGAAGCACGACTGCCATGTGTTGTGTGCCCCTGGCACAGCTGGAAGTACTCTCTGCAATCGGGTCAGTTGAAAGTTCCTTTCAAGAAGAATGTTACTCTTGGTACCTATCCAGTGAGAGTGAATTACAAAGGACAGGTGTACATAGGAGTTAAGTCTTTGGCGCCAGACTATTTCAATGGTGAAATTGACTTCTGAAATTCAACAGTCAGTGGCTGCTCAAAGGTGGAATTGAGGAAGCACTAGTGGTGAATGGGTGTGGTTATGCATGTTGAATACAGTTTAAGTGTTCTGTGTGCTGATGTTTGGGATGCCTGTGGTTTACAATGTGGGGTATTACAGTGTGCTGGAAGCTTCCTTAAACACTGTACATGCAACATCGTATCTTGGGAGCTTTGTCATTTGCAAGGGATAACCGGGATTGATTACCCTCCTGAGAGAATTTACTTAGCCAAGTTAGCATTCTCAGTCCTTTTTCTTCTTGAGGGGTGGAGGTGTCCATATTAAACAgactaatttaagagaaaatatatgacctttttagttgtctggacaaagaaaactgtctgtCATAAGTGGGTGTCTGTACAGCGGGGTTCCATTGTATTATTAAGGAGTCAATTCAACAGTTTGTTTACAGAAAACTGATATTCCTGTTAACAAGCAGAAAGCAGATAGGATTAGTGTCATGTACATGGATCACTGATTTACCTCAAAGGCTcaatggttgtttaccatttgatCGGataaaccggttggtcgacggttgcagtaaatgggacGCATTAaaaacccaaatgaaaatttccatgggacGCGCATGTTCCATTTCCAGAAACATTCCGAAAGGTCGGGTTTACAGAGcaaaaggcctggaactggtagaaatagcaaatggaacgcacatttccgtttggacattttggactaccttttcaAGAAATCCCGTTTTCTCTGGAACttttccatttgggaagaccaaaatagccttcccatttacattccaaacgaaatttccggatttttttgtaaacaaCCAATGATTAATAGTAAAATagagaaagtaatgattttCAGCTATAGTTTCAGTTTCAATATCTTATAGGCTATAAAAACGCAGAGGAACAACACAGGGAAAAGTGGCCTGGCCTCACTAGCCTTGCTTTCGTGCAACTCAGCCCGGGTCGTCAGAGcagtccgccatatttgcattcggtgtatagACTGGGAGTCTTATTAGAaaggtcacctcgcagctcttacaaagtctcacctgattggggaccacccttcaggtgagacaaaagaacaaacaacacaaacagtgGACCCTTGTCCTAAAACagtagggctgcgacactatccccgctcctgaaatttagagcttataggagctgcgaggctaccgatTAGAAAGCCATTATGACTTTTGGTTTGCATCGGAAACATCTTTGAAAAACCGTTCATTCTAGACAATGTAAAGATGTGTTTTTAATCTTTATTAAAACCCATACTTTTACAAGGTTTTACATAAATTATAAACTTTCAAATCCCATGGCCGTTAAGCTCGTGGCCGTAGGGTGCTGGCCATTGACCAGCGATAAACATACTCTGTGCTGTCttcgaaataaataaaaactacaTGTAGGAAATATAAGTTGTAAATAACTTAAGTATTTTTCTTCCGCCTCATACTCCAACAAGAGGCTTCAAGTAGCCTATACTCATGCGAATAAATTTGCATGTACTAGACGCGAGCATAAATTTACATCACAGTGTGACCCGAAACGAAAAACGGAGGCAAAACCTTAACCCATGCGCAGTAAAACGTTTTTAAGGTTTATAATTTTAGTCCAAGAGCTCTCTTGTGTTCCTTATTTCTGAAATACGCACACAGAAGAAATCCTAAGAATAATTATCGTAGGAATTATTTGTACAAAATTAATAAAGGGC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00355	Rieske	Rieske [2Fe-2S] domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017941	Domain	Rieske [2Fe-2S] iron-sulphur domain	Interproscan
IPR036922	Homologous_superfamily	Rieske [2Fe-2S] iron-sulphur domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21496	FERREDOXIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0051537	Molecular Function	2 iron, 2 sulfur cluster binding	Interproscan