Detailed information of pspe_0.1.m1.52296.m1 in Pachyseris speciosa

Genomic Location: Sc0000691:423857...435427
NR annotation: CAH3116068.1, unnamed protein product, partial [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P35061Histone H2A OS=Acropora formosa OX=126732 PE=3 SV=2
P04735Late histone H2A.1 OS=Psammechinus miliaris OX=7660 PE=2 SV=2
P19178Histone H2A OS=Platynereis dumerilii OX=6359 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00538Linker_histonelinker histone H1 and H5 familyDomainInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF16211Histone_H2A_CC-terminus of histone H2AFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR002119FamilyHistone H2AInterproscan
IPR005818DomainLinker histone H1/H5, domain H15Interproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR032454DomainHistone H2A, C-terminal domainInterproscan
IPR000164FamilyHistone H3/CENP-AInterproscan
IPR032458Conserved_siteHistone H2A conserved siteInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23430HISTONE H2AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0006342Biological Processheterochromatin formationInterproscan

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