Detailed information of pspe_0.1.m1.52348.m1 in Pachyseris speciosa

Genomic Location: Sc0000694:37071...54233
NR annotation: PFX30504.1, DNA polymerase iota [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6R3M4DNA polymerase iota OS=Mus musculus OX=10090 GN=Poli PE=1 SV=1
Q9UNA4DNA polymerase iota OS=Homo sapiens OX=9606 GN=POLI PE=1 SV=3
Q9VHV1DNA polymerase iota OS=Drosophila melanogaster OX=7227 GN=PolI PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|UBM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00467KOWKOW motifFamilyInterproscan
PF11799IMS_CimpB/mucB/samB family C-terminal domainDomainInterproscan
PF01777Ribosomal_L27eRibosomal L27e protein familyFamilyInterproscan
PF00817IMSimpB/mucB/samB familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008991Homologous_superfamilyTranslation protein SH3-like domain superfamilyInterproscan
IPR036775Homologous_superfamilyDNA polymerase, Y-family, little finger domain superfamilyInterproscan
IPR041991DomainLarge ribosomal subunit protein eL27, KOW domainInterproscan
IPR005824DomainKOWInterproscan
IPR017961DomainDNA polymerase, Y-family, little finger domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001126DomainUmuC domainInterproscan
IPR038655Homologous_superfamilyLarge ribosomal subunit protein eL27 superfamilyInterproscan
IPR001141FamilyLarge ribosomal subunit protein eL27Interproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46404DNA POLYMERASE IOTAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0019985Biological Processtranslesion synthesisInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan

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