Gene detail

Detailed information of pspe_0.1.m1.52620.m1 in Pachyseris speciosa

Genomic Location: Sc0000702:471884...476356
NR annotation: CAH3168732.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.52620.m1

TTCATCTCTATCATGAAACCATCTGTCACATCATGGGTTAAGGGTTTTGATATGGGAAATTGGGCCACTCCCTCTTCTCTGATTGCTGTGAATGACAAAGGTGAGCTGGTAGAAGGAGAAGGTGAAGTTCAAGTTGAGACGACTGCCATTCATAAAGGTGTTCATGATGGGAGACCAGATGCTGTGTGTTTTTCATCTGCATTCTCCATATACTACAGCTTTAGGAGCAGCCAAGAGCTGCTCAGAGGGGAGCGTTTGGTTAAGCTGATTGGAAACAAATCTGTCCTGTTCATGGCAAATCATGGAGTGTTGTTTACTGGACCTACCGTAGCTATTACGTTTGACAATGCTTACTTCATGGAGAGAGCTTGCATGATGCAGATGATTGCAATGCAAACTGGGAAGAAACTGGGCAAGTTGTCAGATGAGGTCAGTAAGCTGACTTACGAGCAGATTCAGGCGGAGCTGGATTATTATGCTAACTCTCATTTTAAGGGGATAAAGGCTGTCTTACAAGAAAAGGACCCTGGATTTTTGGATCGTTAGAATTTGTCTTTGTAGATGATAATTAAAGCCGCGAGGAGACGCGAGAATTGAAATTTTGGGTTTAAAGGATGGGAACAGGTGGGGTTGGGGGATTACAACCTGAGAACGACGGAAAAATGAAAGGGCTTTTGTTGGAAACCATAATGTCAAATTCCTTCGAAATTAAGCCATTATTCATTGCCTTTAGCACAGGATAATTTGAGGTGCAAAACTAATGGGAAGAAAGGAAACTAATTTAAGCAACAAGACCAAACCTAAATGCATTCGAGGCATTGTTTCAACCCATTTCCTGCCTTGCCATCAGTAGCAATCAACACCAGACAGCAGTAACGCAGCGTTTGGTAGCCATTAAAGCTGAACATGTGCATGTGTATGCGTGTGCTTAATGGACATCTTCCAGCTTTGTAAAAATATCTTTAAGTAGCATGTCAGTGCCCCACTCTATTATGAACCGTGTGAGCGTTGAAGAAATTCATACGTAATAAAATGAAGAGGCCATTTGGTATAATGGGGATCAAGGGTTGGTGTATTTAATCATCATTTAAATGGAGAAGACAATAAATCACTTAATGCACTTATCACACCATGACGGTTGTTTGTATGTAACTGAAGTGTACATATTTTTTTAACACTGGTTAGTCCTTTTCAATgctgttttctttgttgttttcattagcCAGCGCTTGGTTCTGTGAAGTTGGTATACTAACATTAATTCTCACGACACTATCTTATCCACTCTATTATTAAACTTTAACTCATGATTTCGTGAATGAAAGTAATTTCTTATGAGACCTGCGCACATCTAAAGCCGAGGGACGAACGTGTTTCCTAATTAAATCTAGTTCCAGACTACGCTCTTGACGACTTTAAATCTTTTAGCATGGCCGTTGGAGATCTGGGGCCTGTTTCTCCCAAGTGGGTGGTTAATTTCCGACGATAACCTGCCCAATGAGCTCCATAAAACAAGCCATTTCAGAATCAACGGTTAAATTCCAATCTCTGTCCTGGAACAACATGcacataaaacaaacaaaagatttTTGAGACAGCAAATTTTCAGGACCGTGCTGAGAACAAGCCCCTGATCACGAACGACAAAATAATTGTAAGGAGGCGTACTAATCGTTGCGTTTCATTGCGACGTTAGAGTTGCTGTTACCGTTCCGAATTTCCTTATAGAAGAATTGGTTTGTATCCTAGAGAGAAGGCAGATCGGCGaataccgtattttctcgaaTAATTGCCAGGACcgataatttatttatttttgttcgcACCACCCACTGCCAAGGGGTGGGAACGGCGATTATTCGGGGGAAGCGTTGCTTCAAACATTTCCaccaggggggtggggggacAATCGAGGGACgagaaaatacggtatttgTTCTGGGGTAACCAACGATCGCTTCTCCTCTTTCATACAAAACGTACGGCGAGCCTTCGTTTGACTGGTATTTAGGCTTACTAATATAGAGAGTGAAAGTTATGAGAGGATAAGGCAACAAATGAGGTTAATTTCTGAGGGAGCTGGGGTGGGCCAATGTATTTTTCACTTATTATCAGCTATTCGGACCAATTAACTTTATCCCAACATTAGAGTGGTTTGCAATTAAAACACatggtttgctttggttttcctttacttcgctctgagaggccagcaaaactcgcgccactttctcaaccaatgagaagcaaagccaACACCACGCGCGCCTTTCCAGCGCTTTGTGTCGGTTACGtgtaatagaccttattcgtattcttcgtaatgagctggaactagtgtgcacacgaggcttaaacgggggaatcttttcatatgtaatgtattcccccgcaagagcctctacttcatgctagatccagttcaataccgagaacaCGAATGTGGacttttgctttgaattctgattggctcattttaCTGTTTCGGTCTATTGTGATTGGCTGGGGCAATTGGTTTGGATTTGTTTccacgacactcaattgaaaactgctctaaagcTACCCAAAATACAATCCTATCCTAAACGACCCCTTTATTGAATGTGTATAAAATGGTAAGGTTAACACGTGTTAAACAGCTTgcaattaacaattggttcatgcatcagcgtgcgttcatcgag

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00596	Aldolase_II	Class II Aldolase and Adducin N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051017	Family	Aldolase class II Adducin subfamily	Interproscan
IPR001303	Domain	Class II aldolase/adducin N-terminal	Interproscan
IPR036409	Homologous_superfamily	Class II aldolase/adducin N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10672	ADDUCIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005856	Cellular Component	cytoskeleton	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan