Gene detail

Detailed information of pspe_0.1.m1.52874.m1 in Pachyseris speciosa

Genomic Location: Sc0000710:346466...351373
NR annotation: XP_020610850.1, uncharacterized protein LOC110049396 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

pspe_0.1.m1.52874.m1

GAGAAGAGCCCAGCCACTGTAGAGGCAGGAACTTCAAATCCTCGAAAAAGTAAACGGAAAAAGAAGAAGGCGCAAGCGTCACGTGAGGACAGCAAAGGTGGTGGAATCTTGGATTCATCAAAGCATCCAACAGACAGTGTCAAGAATGCCTCTTTGGAAAAACCAAACATGGAAGATGAAGTTTTGCATAGTGACAGAAAGGCTTCTGATAATGGTTTCCTAGTCCCagacaaagagaaaaaggagCTGTCTTCCAGTGAGCCTTGTATCGGGGAAGGAGCCATTGAGAAAGATCTCGCTGCATGCAGTTCTATTTTCGAAGCTGTCAAAAATGCTCTCACGGTTCCATCACTTTTGTACAAGAAATGGATAGAGCACATCGAGAGCCTCATTAACGATAATAAAGTCAGCCCAAACGTTAGAAATGAAGATGGCCAGAGTCCACTCTTATTTAGTCTGCACTTTGCGTTAAGTACCATGTGTTACGACGGGTGGTTTTGGAAAAGATTCGTGGGGCTATGGCGTCTTCTTTTGAAAGCAGGAGCAAATCCTAAAGTGAAGGATGATATGGACAGGTCGCTTCTTCATTTACTCTTGGATAATTTGCAAAGTGGACAGCTGCACGAATGCCACGaattggtatccaactgtttGCTAATTTTACAGAAATATGGATTTGACATAAATTCAAGAGACTCTCAAGGAAATAGCCCATTGCATTTGTGGGCAAGCCTCGCGAACGAACCAGACGATGCATTGCTTGAAGTAGGAGATGTTATCATCTCACGTGGTGGTGCTGTTACTGCAAGAAACGACAGCAATGAAACGCCGCTTCATTTTTCACAGAATTGGAAATTTGTGGATTTCTTGACCCGTAAAGGTGCAGATTCAAATGCCCAAGATCTTCGTGGGAACACACCTCTACACAAATTCATTGCAGGAGAAAATCTCATAGTAGATGAAGTTAGCAAAAGTCGATGGGAATATTGTATCAATGCTGGAATGGACCCATTTTGTAAAAACTACGAAGGAAAGTGTCCATTTGAAGCTCTACTCGACAAAAATCTTTTCAGAACAGCGTTGAATCTTTTGAAGGTGATTTTTGAAAACGATTGTAACCGAGAACTTGCGCGATCTGCAAGTACTTTTAAAGATCGCAAAGGAGACTCTTTGCTGCATATTCTCTGTGTTATCGAAAACGAAGATGCGCAATCTATCTGTGAGTGTTTGCTGCAAAACGGATGGGACGTAAATTTGCGGAACGAGGGCAAAGAGACGGCTCTGCATATGGTATGCAGTAAAGTTGCCGACGGGATTTTCTTTTATCCCCGCATCATTGGAAACGCAATTACCTTGCTTCGAAAGTACCATGCTGATGTGAACCTTCTTGATGGACACGGCAACTCTTGCGTTGCTATGCTCTGTAGAAATGAAGACCACCGTAATCTTCTTCTGGAAGACGTTGAAAAAGTCAGCATCCCAAACCGGATAAAGTGGACCCCAAAGTCCACCATTCATAGGCCAGCATTGGCGGAAATTGCTCGCGGATCAAATTCCATTAAAGCCGACTGTTATCACTACCACCAGAAGCAGATAGGAGAAggttctttttctcttgtgttCCCCGCCCTGAATGAAAACGATGGAAGAGAAGTGGCATTGAAGAGATATGAAAAAGCGCGACTGGAAGAAAAGGGAGATGTCTTAGAGCGAGAGGTCAAATGCTTTCTTCAGCTGTCCAATAGTCCCCATGTAGTTAACTACATCAACTGCACAAGTGATGTCCATTTCAAGTACTTGGTATTTGAGCTCATGGAAGGCTCTTTGGAGGACTATGTTAGTGCTGAAAGAGAATGCGAAGATACCTTAAGAATCTGTAAGGACATTGCTTCTGGCTTAGCATTTTTGCATTCAAGAGAGATAGTCCACAGGGATCTCAAACCGAAGAACATTTTATATACTACATTCCCAAATTTAACTTTCAAGATAAGTGATTTTGGCCTCGGTAAGATTCTCACCTCAAGCACAGGCAGTGGTCAAAGTGAGACAGTTCAGCACTCGAGAGCTGGAACGAAGGGCTGGATGGCCCCTGAACTCTTGAAAGAGGGACCGAAAGAACACAGCAAGGCCACGGATATTTTTAGCTGCGGTCTTGTTTTCCACTACTGCATGGCGAAGAAAAAACATGCTTTTGGATCTTATTCTGATGATTCAACAATGAATCTTCAAGAAACGGAAAAGAATATCAGAAAAAACTACCGTTGTTTCTGCCGCTCCCTAACTCCAGAGGCTTCTTGCCTGCTGAAAGAAATGCTAGATAAACGACCAGAGGGACGACCGACAGCGCCTTCCTTGTtgcaatttccatttttttgggAGAATCTCAAGAAAGTAACCTTTTTCATAAACGTGGGCCTTCAAAGTCAATTTCAAGAGCCAAGGTGCATTGTTCAACGTCCACTGACTAATGTAGAAGACAGTCTAGAGCGTGATTATCGTTTCCATCGTGATCGCCAGGGGGCAGACTACGACTGGTATGATGACATCAGGGAGATACTGGATGCTGTAACTACTGATCACCGTCATCGAAGCGTATAA

Transcript

pspe_0.1.m1.52874.m1

Protein

Uniprot

Uniprot term	Description
P32361	Serine/threonine-protein kinase/endoribonuclease IRE1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=IRE1 PE=1 SV=2
Q9SF12	Inactive serine/threonine-protein kinase/endoribonuclease IRE1-like OS=Arabidopsis thaliana OX=3702 GN=At3g11870 PE=3 SV=1
Q924X7	Serine/threonine-protein kinase 33 OS=Mus musculus OX=10090 GN=Stk33 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR045133	Family	Serine/threonine-protein kinase/endoribonuclease IRE1/2-like	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13954	IRE1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004521	Molecular Function	RNA endonuclease activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0030968	Biological Process	endoplasmic reticulum unfolded protein response	Interproscan
GO:0036498	Biological Process	IRE1-mediated unfolded protein response	Interproscan
GO:0051082	Molecular Function	unfolded protein binding	Interproscan
GO:0070059	Biological Process	intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress	Interproscan
GO:1990604	Cellular Component	IRE1-TRAF2-ASK1 complex	Interproscan