Gene detail

Detailed information of pspe_0.1.m1.53013.m1 in Pachyseris speciosa

Genomic Location: Sc0000715:384820...397003
NR annotation: KAJ7350227.1, hypothetical protein OS493_037690 [Desmophyllum pertusum]
Species Pachyseris speciosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3SZV5	Proteasome maturation protein OS=Bos taurus OX=9913 GN=POMP PE=2 SV=1
Q9Y244	Proteasome maturation protein OS=Homo sapiens OX=9606 GN=POMP PE=1 SV=1
Q5R9L9	Proteasome maturation protein OS=Pongo abelii OX=9601 GN=POMP PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007747 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05348 all species →	UMP1	Proteasome maturation factor UMP1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008012 all species →	Family	Proteasome maturation factor Ump1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12828 all species →	PROTEASOME MATURATION PROTEIN UMP1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0043248 all species →	Biological Process	proteasome assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11599	POMP, UMP1; proteasome maturation protein	-	Proteasome	ko03051	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.