Gene detail

Detailed information of pspe_0.1.m1.54875.m1 in Pachyseris speciosa

Genomic Location: Sc0000779:185105...199442
NR annotation: KAJ7370095.1, hypothetical protein OS493_034306 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.54875.m1

AGCGATCGTCTGAAGTCGCTTAATGTCGGCAGCCGATCACCATAATCATATTCACCACGTGATCAGTTGATAGTCTCAATGTTGTTTCCAGAAGATTTTTAGGCCTTTGAGAAGGCGTTCCCAGAGTGAAGACAATCACTGTTGTAGTCAAGAACAGCTGCAGCCATGTTTGTGGAAATTGTCGCTTTGCTGGTCGTTCTTGTTGTCGTTTATGTCTCTTCAACGATCTGGCAAAACCGTCATCTTCCCCCGGGTCCATTTCCTCTGCCTTTGATTGGTAACCTGCTGTCGATTGGACAAAATGCGCCTTACCGAGATCTCACCAACATGACAAAAAAATACGGCAAGATTTTCCGCATATATATGGGACGTAGAAAACTTGTTGTCGTCAACAGCTATGAAATAGCTCGGGAGGCACTTGTCACAAAAACAAAGGATTTCGCAGGGCGACCTCCACATTACTTTGGCAGTATATTCGGTCGAGACTCCACCGATATCGTTTTTCAAACTTATTCACGGAGATGGAAAGCACAACGCAAGATGGTTATAACGGCCATGCGCGTGACCGAAGACAAAGCTAACGTAGATTTACACATTGAAGATCTGTGCGAGAAATTTCGATCCCATCGTGAGGCACCATTTAATCCTCGAGATCCTATCTTTACATCTATGGGTAGCTGTATGGCGTCCATGGTTTTTGGGGAAGAGTTGCAGATCAATGAAAGCGAACTAGAGGCACTCATACAGGCCCTTCACGTATTCGCTACTTCTCTAGCGGTAGCTAACTTAGTAGATACTTTTCCCATTTTCAAGTACATCCCTATTGGCATCatcaaaaaagcaaaacaagccGGAGTGTATCGAGATGAGCTTTTTGAGAGAAAATATCAAGAACATGTGGCCACATTTCAAAAGGATAATATCAGGTCTGCAATGGACGCCATGTTAAAGGACTTAACTGAAAACTACAGCAATTTACTGACGGAAAAACATTTAATTTCAAGCGCTTCCGATGTTTTTATGCCCGGCACTGAGACACCTTCATCTGTGCTCATTTGGATCCTATTTTACGTCGTCAAATACCCGGATGTACAAGCTAGGTTACATCGTCAACTAGATGACGTCATCGGGAATACCAACCGACTACCCGAATTGTCAGACAAACCAAATTTACCTTATCTGGAAGCATTCATTGCAGAAGTGCAACGCATTGTGAGTGAAACTCCATTGGCGGCTCCTCACTCGGCCACACGTGACACGTCCCTTGCGGGGTTCTTTATCCCGCGGGACATAACCGTCTTTGTTAATCTGTGGGCTATTCATCACGATCCTGATTACTGGGAAGATCCATTTTGTTTCCGGCCGGAGCGGTTCCTGGACGAGCAAGGGCGTCTGCGGGTGGAAGGCATCATGCCGTTTTCTGCGGGAATTAGGTCATGTCCTGGAGAGGGATTTTCCAGACGATCAGTTTTCTTGTACGCAGCCAGATTGCTGTACAGTTTCAAATTTGAATGTCCCGCTTCTGAAACATTACCTGATGAAGAGGACAGTGATTATGGTATCGTTCTAAATTGCAAGCCTTTTAAGATCTGCGCTGTGCCAAGAAGAAATTAGAGAGACTGGCTTGGGCAATAGTagaatgttgaagtaatgaaTACAGCGACGGCACTTCTGTTTAAGTTGCTAAAAGGGTCCCCCATGTTGGACGACATCACTGGCCCGCAGCATCGCTATTTGCATATGTATCCTGTAATGCCCATAATGTAATGCCCATCTCGTAGACGATATAACAGACTATCTATCAAAgataaaacttttaaaaataaCGTAACATAACGAAAACGTTAGGGAGGGGTtctatccccccccccctccccccaacccTTTTGCACTGTGGGGGATGAATTTTACGTCAGAGGGTTAACTGGCACTCACTCAAAGGGACGAGAGGTGGAGATTCGCAAGCTCTCCCCTCCACTTTCTATTCTTTTAGCGTCTGTAACGCCGGCTAATATGCATGAGTGGCCCTCAAGCGAAATCAGACCACTGAGCAGTCTATTTCTTCTCCTCAGTGAGCATAAGTTCTCTAGCGCGCATTGCATCTAGCGAGCGGCGAGAAAGGCTCTTTTAGAAAAGCCGAAATGTTAGCGCTGGAAAGTTACTTTTTGAGTTTTCAGTTTACTTTGAAACGCAAGGAAGGCTATGTTATTGATATTCATTACTCGACTCATGACTGATTTATTGCATAATTTATATTTAGAATCATTTAATCTTCAATCTTGCGAGGAAACCCAATCATCACCattgttttgtattgttttgtagTATCGGTaagtataaaaatatatatattgaaagtaaATTGGTGACCATTGGAAAGCACGccaaaaacaagaggctacaataagcctaaactcgggcttgcaaaaaacagtattgtatccctaacttagcgctaaacaaaagaatagagggaagtctgtctttcttacatcggacgcattgtgtttagcttgtgttggagtctatttctttagacccctatcaacatatattcctctaaaatacagctcaaccattgagaacaataattataacacttgtaaaaaatatttctaaaagaacaagaaaaagaggaacagaaaaaataaagcccgtgatatataccactaaaagacatcaaacccgggttagctgcgtcacaggcaggaacaatgacctttaggccacagaggtttatcgttatgcaaggtgataaaaatagtgtattgattccaaaaaaactaagcacacttgttttcgcttcgatggataattgtttgagaaaggaaacgcttatcgaacgatataggattttttcgcataaacgttaatgcatctcggtgaaatgtgagtagaaaattaattagcagagtgaaactgtttacaaatacgtcaatccagggtcatttgaaacacaagaaaggaacgtttctggacagtttcaagtgacgctagtacatttgtaaaaactaatcgcttatcattcaaaaattaaagtccagaaattgagatattgtgggaaaatagtaaataaactacctgtcaaagtcttgagttattcaacaaaatgtacatctcaatggagcggatacggggtaCACGGCAGTCCAtttggagttaaattttggtcatgttaaaagctttcttctcggtgttgaacttgcaaacattcatatagacacttctcttaacatattagttgttcagacttcaaagacacaaggtgaatcgacgttttccgatacgtgacaacaggcatcattcttgctgttgatatgagatttacacttccaaatcactcggccgtgaaaggtcaaactccctttgtctgtagtctctaatttttggcgcgcccctcgcgtcgcgtctcctcgcaacttcgcgcgcgcacgtgtctttcgcccgccccacaatccatcgccaaaattagagactactcgcagtctactgaagcagacacgaggaaacacggcagtccatctggagttaagtttactcattttaaaagctttcttctcgccgttgaacttgcaaacattcgcatagacacttctcttaacatattgtttgttcagacttcaaaagacacaaggtgaatcgacattttccgatacgtgacaacaggc

Protein

Uniprot

Uniprot term	Description
Q92095	Cytochrome P450 1A1 OS=Opsanus tau OX=8068 GN=cyp1a1 PE=2 SV=1
O57525	Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rana dybowskii OX=71582 GN=CYP17A1 PE=2 SV=1
O42457	Cytochrome P450 1A1 OS=Sparus aurata OX=8175 GN=cyp1a1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067	p450	Cytochrome P450	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036396	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR017972	Conserved_site	Cytochrome P450, conserved site	Interproscan
IPR001128	Family	Cytochrome P450	Interproscan
IPR002401	Family	Cytochrome P450, E-class, group I	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24289	STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0004508	Molecular Function	steroid 17-alpha-monooxygenase activity	Interproscan
GO:0042446	Biological Process	hormone biosynthetic process	Interproscan
GO:0042448	Biological Process	progesterone metabolic process	Interproscan
GO:0047442	Molecular Function	obsolete 17-alpha-hydroxyprogesterone aldolase activity	Interproscan