Gene detail

Detailed information of pspe_0.1.m1.5499.m1 in Pachyseris speciosa

Genomic Location: Sc0000005:236496...237491
NR annotation: CAH3106067.1, unnamed protein product [Porites lobata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6EJB7	Transcription factor Sox-3 OS=Danio rerio OX=7955 GN=sox3 PE=1 SV=1
Q5FWM3	Transcription factor Sox-3-B OS=Xenopus laevis OX=8355 GN=sox3-b PE=2 SV=1
Q68FA4	Transcription factor Sox-3 OS=Xenopus tropicalis OX=8364 GN=sox3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12336	SOXp	SOX transcription factor	Family	Interproscan
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022097	Family	Transcription factor SOX	Interproscan
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR009071	Domain	High mobility group box domain	Interproscan
IPR050140	Family	SRY-related HMG-box transcription factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10270	SOX TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0009653	Biological Process	anatomical structure morphogenesis	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan