Detailed information of pspe_0.1.m1.55627.m1 in Pachyseris speciosa

Genomic Location: Sc0000807:381441...400161
NR annotation: KAJ7383228.1, hypothetical protein OS493_030031 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q00174Laminin subunit alpha OS=Drosophila melanogaster OX=7227 GN=LanA PE=1 SV=2
Q16787Laminin subunit alpha-3 OS=Homo sapiens OX=9606 GN=LAMA3 PE=1 SV=3
Q61789Laminin subunit alpha-3 OS=Mus musculus OX=10090 GN=Lama3 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05662YadA_stalkCoiled stalk of trimeric autotransporter adhesinMotifInterproscan
PF00055Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan
IPR008635DomainTrimeric autotransporter adhesin YadA-like, stalk domainInterproscan
IPR008211DomainLaminin, N-terminalInterproscan
IPR011049Homologous_superfamilySerralysin-like metalloprotease, C-terminalInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan
GO:0019867Cellular Componentouter membraneInterproscan

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