Detailed information of pspe_0.1.m1.56182.m1 in Pachyseris speciosa

Genomic Location: Sc0000829:387312...390603
NR annotation: KAJ7357484.1, hypothetical protein OS493_025000 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9EPL5Interstitial collagenase A OS=Mus musculus OX=10090 GN=Mmp1a PE=2 SV=1
P03957Stromelysin-1 OS=Rattus norvegicus OX=10116 GN=Mmp3 PE=1 SV=1
Q9Y5R2Matrix metalloproteinase-24 OS=Homo sapiens OX=9606 GN=MMP24 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00413Peptidase_M10MatrixinDomainInterproscan
PF00045HemopexinHemopexinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR018487RepeatHemopexin-like repeatsInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR018486Conserved_siteHemopexin, conserved siteInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR036375Homologous_superfamilyHemopexin-like domain superfamilyInterproscan
IPR000585DomainHemopexin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan

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