Detailed information of pspe_0.1.m1.56205.m1 in Pachyseris speciosa

Genomic Location: Sc0000830:168535...179337
NR annotation: XP_044183161.1, ubiquilin-1-like isoform X1 [Acropora millepora]
Species Pachyseris speciosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9NRR5Ubiquilin-4 OS=Homo sapiens OX=9606 GN=UBQLN4 PE=1 SV=2
Q9UMX0Ubiquilin-1 OS=Homo sapiens OX=9606 GN=UBQLN1 PE=1 SV=2
Q5R684Ubiquilin-1 OS=Pongo abelii OX=9601 GN=UBQLN1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005232 (this species only)

 Pfam domain
No Pfam domain signature was detected for pspe_0.1.m1.56205.m1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR006636
all species →		DomainHeat shock chaperonin-bindingInterproscan
IPR015496
all species →		FamilyUbiquilinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10677
all species →		UBIQUILINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0031593
all species →		Molecular Functionpolyubiquitin modification-dependent protein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K04523UBQLN, DSK2; ubiquilin-Proteasomeko03051deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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