Gene detail

Detailed information of pspe_0.1.m1.5697.m1 in Pachyseris speciosa

Genomic Location: Sc0000006:534387...536947
NR annotation: XP_015770171.1, PREDICTED: uncharacterized protein LOC107348633 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

pspe_0.1.m1.5697.m1

ATGGTTCAATGCGTTGTTGTGGATTGTTCACATCGAACTCCCAGAGATCGTAAGAAAGGAATTAGTTACCATCGATTTCCTTTGAACGATGCAGGTAGACTTCGCGAATGGCTGGCAAACATTAAGAGAAAAAATCTACCACCTCTTGAAAATTGCACTATCTGCTCTGCTCATTTTGAGCCTTCGTGTTTCCAAGAGGATTTTCGATCAAGGATTCTACCTGACGGTTCTAGGAAACGGTTCTTAAAGGATAATGCCGTTCCTACCTTGTTTCCTCATAAGAAGAACACAAGTCAAAGGCCTGCCAGCGAGAGCCGAAAGTGTAAAGCGTGTCATGAAGAGGTTCTTAATCAAATTCTGGAGAGCAGTGAAGCCACTGAACATCCACTAGATGGAGATTCTACGACATCGCAGACATCAGCATCTGCGCCTAATGGCAATCCAGCTGAAGCACCGCGCTCAAAAGAAAAACCGcgaaggaaaaaaaggaaaatgcaaGGCTCCCCTACTCATTTGGGAAAGGACAACTGTAGTCAAACAGAGGTAAAGATGGTTGATAGAGCGTGCCAGACAGAAATGCCATATACTGTAAATTCTCCTCAGAAAATTAAATCTATTCCCTTAGCTGACCTTCGTCATGCTGTCTCGAATGACCATGGTTACTCATCTTCTGGTGTCTCATGTCCTAACGAAGAGGATGCCAATAGCCAGTCAGTAAAATCGAAACGGCAATTAGAATTTTCGGAGATTGAAGTTGAATGCAAAACGGAGGTCAGAGAAGATGAATGGCTGCCAGAATTGTCTGACTTTGACGAGTCTGAATTTAGTGATGACGATAGCGATTATTGTGTGGAGAATTCTGACCCCGAAGACAGCTACGAGGAAAACGAAGTGCCACAAAACATGGAAGATTTCGTCGAGGAGGAAAAAGAGTCCAACAACTGGCTTGAAGAGGACTGTGGCCCTCTTTACAAAGAACGAAAGTTCATTGTCTTTGAAAGTAAATTAAAGGAGCTTTTTTCACGCAGTGTCAAATGTCAAAACTGTGGACGGAAAGTTAAAAACGTGACACTTAAAACGAAAGGGTCCCTTGCCACTATCGAAACCCTTGGCTGTTGCGAAAATCCATTGCGCTGGCAAACACAACCGTTTGTCAGCTCAATGGTGGCTGGTAACTTACTGCTGAGTGCCGGAATTCTTTTCACAGGAAATGATTATGGCAGCATTGCCAGCATTGCAAAGGCAACTAATATTCAATTTTTCAGTGAAAGAAATGACAACGTCACTCAGAAAAAGTACCTGTTCCCAGTCGTAAACAAAAGGTACGTTGAACATCAAGCGGAAATTTTGAACGAAGTTCGAAACACAGAGGTGGTGGCTGGGGGTGATGGTCGCTGTGACAGCCCAGGGCACTCCGCGAAATATGGAACGTACAGTATAGTGGACACAGTTTCATCGAAGGTGCTTGATTTTTCCTTGGTTCAAGTTACCGAGGTTAAAAACTCAAACGCAATGGAATTAGAAGGGCTGAAACGTTGCTTGGATCacttaaaagaagaaaaagtggTCATTTCGAAACTTGCCACAGATAGGCATGTGCAAGTACGTGCTCACATGAAAAAAGAGAGGCCTACCATTAAGCACAATTTTGATGTTTGGCACCTGGCTAAAtcagtgcaaaaaaaattaagcaaaaaGGCCCAAGCCAAGCCCTGCGTTGCTCTCAAGCCGTGGATTCATGCAATCGTAACTCATCTCTGGTGGTGTGCAAAGACCTCAGAGGGTAATGCTACCGAGTGTGTGGAAAGGTGGAAATCCATCGTCTATCACACAGCGAACATACACCACTGGGAAGGTTCTCAGCGTTTCCATCAGTGTGCCCACCCACCCATCCCACGGGAAACCAAACGAAGGAAGCAGTGGCTAAAAGTTGGAAGCCCTGCTCATGATGCCCTCAAGGAAGTTGCATGGAACAAGTCACTTTTAAAGGATATAGCCATGCTTGCAGAGTTCATCCACACGGGCATCTTGGAGATGTACCATGGTCTGATGGCGAAGAAGTACTGTCAGAAGGTGCAGCATTACTCCTACCATGGCATGAGAGCACGCACACAACTTGCCGTTCTTGACCACAATCATAATGTGGGACGTAACCAAGCCAAGACAAAGGAGGGTACAATGAAACACAAATTTGTCTCTCCCAAGGGTAGTCTTGGCTGGGTTGCAAAGCCTCAATACGAGAACAAGTCTTACCAGTTTTTGGATGAACTTATGGTTAGTCTTGTAGCGTTTAAGACAGGTCAGATTGAAGTGCCTCCCGTTCCTCCGAAACCTGCTGCACCAAACATTGCTCCCACACCAAGACCCCCAAGGGATAACTTACTGGAGACACACAGATCTCGCTTTcaagcacacactgtaaacaattAA

Transcript

pspe_0.1.m1.5697.m1

Protein

Uniprot

Uniprot term	Description
Q0P5B4	THAP domain-containing protein 3 OS=Bos taurus OX=9913 GN=THAP3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05485	THAP	THAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006612	Domain	THAP-type zinc finger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31751	SI:CH211-108C17.2-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K26957	GCNA, ACRC; germ cell nuclear acidic protein	-	DNA repair and recombination proteins	ko03400	deepkoala