Gene detail

Detailed information of pspe_0.1.m1.57254.m1 in Pachyseris speciosa

Genomic Location: Sc0000872:239593...249620
NR annotation: XP_029200429.1, carbonyl reductase [NADPH] 1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.57254.m1

CTCGGTCAAGAGATTCAGACTCTCTTCGTAAAGAAGAACAGACCGAAGTGTGAAACGGGATGTCCGTCTCTAAAGTGGCTGTGGTTACTGGTGCGAACAAGGGAATAGGATATGCAATTGTTAAAAGACTTTGCAAAGAGTTCCCTGGAACTGTAATTCTTACAGCCAGAGATGTGCAGAGAGGCCAAGAAGCTATTGATAAGCTTAGTAAGGAAGGCTGTTCGGCAAAGTTCCACCAGCTGGATATCATATCATTAGAAAGCATTCAGAATTTTAAAAAGTTTCTTGAAGAGCACtttaaaatgtttgaaagaacTAAAAGAGGCAATATGGCTTCAACGGCACCATTTACAGAGCAAGCTGAGGTAACTTTGCGCACCAATTTCCGAGGGACTCTTGATGTGTGCCATGCATTGTTTCCTCTCTTAAGACCACATGCAAGGGTGGTCAATGTGTCATCAATGGCCTCCAAACTATCTCAGGTATCAGAGGAATGGCAAAACAAGTTCAGGTCTCCCACTTTAACTGAAGAAGAGCTCATTTCCATGATGGATCAGTTTGTTCAGGATGTGAAAGATGGTGTTCATAAAGAGAAAGGATGGTCCAATACTGCTTATGGCACATCGAAAATTGGTGTAACTGCACTCAGTAAGATACAGGCCAGAGCTTTGTCACAGGATCCTAGAGAAGACATCCTGTTGAATGCTgtgCAGAAACTCCAGTTTACCTGGCTTTATTGCCACCAAACGCTGGTGCCCCTCATGGAGAGTTTGTTAGCGATAAGCAGGTGAAACAGTGGTGATCCTGTGTGCTTGGAAGGAGCATCACCGGTAGTCCTGTGCGTTGTACGTACGTTGTATACCCATCGCGGGTTGTCTAACATTTGCCGCTAATGGCTTAGAAGTATTGATTGATTACAAACCAGTTCCATTTGCACATACTAATAGTAAGAGGAATTCATTGCCGTAGGCTGTGCGAAGTCTTTTGCTCCAGTTTTGTAAAAGAACACTATTCTGAAAACGGAATTTTTATTGGCGAAGGTTCTGAGACCAGGGTTGTTTACTGGTTACCCTAAAAAATACGGAAATTTGGAATGGAAACCCATTcaggtcttcccaaacggaaaatgtcCCGAGAAAACGGATTTCTTGAATTTTAGTctaaaattcccaaacggaaatgtGCGCGGTTCCATTTGCCCaattctaccagttccaggcatttcagctcggatcgttCTGTAACTCGACCTTTGAGAATGTTTGtggaaatggaacacgcgcgtcccATGGAAATTTTAATTACGGTTTTTCGTTCGTCCCAGTTTAATGCAACCGTCTACCAACCGGTTTTTGCAatcaaatggtaaacaacccaggGCGCAGAATAGActggggcccgtttcttgaaagtcccggtaacttaacgggcccgaaaccatattttgaaatcaaaatctcaagaatagtagggtgtgttctgacctctaatgaagccCATTTTGTTCCTTTACCTCGTAACTTTACTGTGTAAAATTCAAAACTTTGGAAACTCCTATCTGGAATCGTAAACAAAACAGCTGAACAGGCACGGTAATTACCGGgtgcttcgagaaacgggcccctggacCGAGCGTCTGAACGTGGCTGCGCACGATTTTTCCCGCCAAAGGGTGCATAGTTGTACGTCTTAACAATAAACCTTATTCTTTTCATTCTGTTATCGGGAACAGTATACATGGAATGCTATCCCGTTCATCTCATAACTCAGAACAGAATAAGCCCCATTAGAACACTGCCCATTTCAATAAATCCTTTTCCGGGATACTTCCAAACGATTGTGCCCGTGGTAAAAAAGTCTTTCTGATGATGAGCATTCACAACTATAAACGCAGGAGTTGTTAGGGTTAGTTGCTTTAAGGTATTTTCTAAGATGTTTTTACTCTCAAACACAGCCGACTTTGAAACGCAAAATGTCGTTCAATGAGGCCCTACCCGAAATTAGGCCTGGATTTAGGCGTGATGTTCGGATTTTTTGCTGTTAAACGTCGTTTATGCACTAGTGTCACCAATGATAAACAgtttttacacttttttaaCAGTCTTTGCACTTTTTAACAGTCTTTAGGTCAATGTATGGTAGTTGCCTTGTCAATAACCAATAAAACATGATAGTCAGTTGGTA

Protein

Uniprot

Uniprot term	Description
Q8MI29	Carbonyl reductase [NADPH] 1 OS=Macaca fascicularis OX=9541 GN=CBR1 PE=2 SV=1
P16152	Carbonyl reductase [NADPH] 1 OS=Homo sapiens OX=9606 GN=CBR1 PE=1 SV=3
Q5RCU5	Carbonyl reductase [NADPH] 1 OS=Pongo abelii OX=9601 GN=CBR1 PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00106	adh_short	short chain dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002347	Family	Short-chain dehydrogenase/reductase SDR	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR020904	Conserved_site	Short-chain dehydrogenase/reductase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43963	CARBONYL REDUCTASE 1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00079	CBR1; carbonyl reductase 1	EC:1.1.1.184 EC:1.1.1.189 EC:1.1.1.197	Chemical carcinogenesis - reactive oxygen species	ko05208	deepkoala