Detailed information of pspe_0.1.m1.57495.m1 in Pachyseris speciosa

Genomic Location: Sc0000882:219221...228158
NR annotation: PFX30368.1, Calcium-responsive transcription factor [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q58CW6Calcium-responsive transcription factor OS=Bos taurus OX=9913 GN=CARF PE=2 SV=1
D4A7U2Calcium-responsive transcription factor OS=Rattus norvegicus OX=10116 GN=Carf PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD
Ubiquitin FamilyDUB|ULP|ULP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02902Peptidase_C48Ulp1 protease family, C-terminal catalytic domainDomainInterproscan
PF15299ALS2CR8Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8FamilyInterproscan
PF00628PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR003653DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR029309FamilyCalcium-responsive transcription factorInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47456PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan

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