Detailed information of pspe_0.1.m1.58186.m1 in Pachyseris speciosa

Genomic Location: Sc0000910:40180...49473
NR annotation: CAH3107695.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q63341Macrophage metalloelastase OS=Rattus norvegicus OX=10116 GN=Mmp12 PE=2 SV=1
Q99542Matrix metalloproteinase-19 OS=Homo sapiens OX=9606 GN=MMP19 PE=1 SV=1
Q9R0S2Matrix metalloproteinase-24 OS=Mus musculus OX=10090 GN=Mmp24 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00413Peptidase_M10MatrixinDomainInterproscan
PF01471PG_binding_1Putative peptidoglycan binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR002477DomainPeptidoglycan binding-likeInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan

TOP