Detailed information of pspe_0.1.m1.58317.m1 in Pachyseris speciosa

Genomic Location: Sc0000916:149572...156051
NR annotation: XP_020607613.1, uncharacterized protein LOC110046266 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9I7U4Titin OS=Drosophila melanogaster OX=7227 GN=sls PE=1 SV=3
Q8WZ42Titin OS=Homo sapiens OX=9606 GN=TTN PE=1 SV=4
A2ASS6Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF08005PHRPHR domain DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR038648Homologous_superfamilyPHR domain superfamilyInterproscan
IPR012983DomainPHRInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10075BASIGIN RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0030424Cellular ComponentaxonInterproscan
GO:0070593Biological Processdendrite self-avoidanceInterproscan
GO:0098632Molecular Functioncell-cell adhesion mediator activityInterproscan

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