Gene detail

Detailed information of pspe_0.1.m1.59531.m1 in Pachyseris speciosa

Genomic Location: Sc0000969:171458...178424
NR annotation: CAH3013609.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

pspe_0.1.m1.59531.m1

ATGAAGAGAGTTTTTTCTACAAAACACGCGAAGAAACGACGGCTTGTAGGCAAGCACGGAGGACTAAAAGTTGTCGCTTCACTAGTTCCTCAGAAACATGGCATGTACGTCTCTGATTTGTTTACCACCTTGATTGACTCTAAATGGCGCTGGATTAGTTTTGTCTACGTCTCAATGTATTCCGGCAGTTGGCTGTTATTTGGCGTTTTATGGTGGTTAATAACTTATCTACGAGGAGACAAGTTTTGCGTCGATAATGTGGACTCGTTTACGAGCGCGTTTCTGTTCTCACttgaaactcaaacaactatcGGCTATGGTGGTCGACAGATCACACCCGAATGCCCGGAAGCTGTGATTTTATTAAACTTGCAGTcgttattaggttttataatcgGTGCATTTATGTTGGGTCTTATTTTCGCTAAACTGTCGCGGCCAAGAAATCGTGCAGAGACAATTTTATTCTCTCGACACGCCGTCGTTGCGCTACGTGACGGCAAGATGTGTCTAATGTTTCGCGTTGGCGACGTCCGCAAAAGCCAGATACTAGAAGCCCATGTTCGAGTTCAGCTCTTTCGTAAAAGGAAAACTCGAGAAGGTCTTGAATTGCCATTTTATCAACAGAATCTACCGGTTGGGATCGACTGGTTATGCGAGGAAAACCAGCTCGATAGTATACTGTTTCTTATCTTACCACTTACAATCGTTCACGTGATAGATGAGAACAGTCCTCTCTACGAAATGCACCCTAAGGAACTACTGAACTGTGATTTCGAGATCGTTGTGGTTCTTGAAGGCacggtagaagcgacaagcatGCTTGTGCAAGCGAGAACGTCCTACATTGCGGATGAAATATTATGGGGACACGAGTTTATTAACACCACTGATGAAAGCAAGTGGAAGTCTGGTCGATATCGTATCGATTTTTCGGTGTTTGACGATACTCGCCCAGTTCCCGATACCCCTCAGGTCTCTGCCAAGGACTACTACGAAGGAAAAATGTTTAAAACGATATCGGAATCGTCTTTGTTGAGTATGGAAACGCAAGAAGATATTGACCGTGATTCTGATTCACCTGTAAGTTTTGAGAAAGGAACACGAGGAAATACCTATGTTTCGAGCAACCTTCTCTCTTCACCCGCATGTTCATCACCGACCTTCGATCAACACACACAGCCGTTTATCGACAGACCTGAGAAAATTCGTCTAGTAAGCAAAAGCGGATCTTTGAAAGTAACAGCCAGGAATGTTCCGCAGAAGACTAAACGATATTTTGAAGATTTATTTACCACGATGATCGACCTTAACTGGGGAGGAGTGATCTTCATATTTTGTGCATCGTATGTGGTTTCGTGGgttatttttggtttcttttggtGGCTGATTGTTGCAGCGAGAGGGCCTTCTGTTTGTGTCACCGGGCAAACCATTGGATATGGTAGCCGGGCAATAACAGCTAAATGTCCAGAGGGTGCCATCATACTTCAAATTCAATCATTGGTTGGTCTGATCTTGGATGCCATTTTGCTTGGGTTAACATTTGCAAAGTTGTCTCAGCCTCGTGAGCGTGTGAAGACAGTCATGTTTTCAGATCATGCTGTTATTGCACCAAGGGATGGAAAAATTGGAGACATTCGAAAGAGCCAAATTGTTGATGCATCCATACGAATGCAGCTGTTTAGGAAGTGGAGGACAACAGAAGGAAGGGATATCCCTTTCCATCAGGAAGATCTCAAAGTCTGCTATGATTGGCGAAATCCTGACAATGACTTTAGGAATCAGCTCTTCTTGCTGTTGCCGATGATGATAATTCATGTGATTGATGAAAACAGTCCCTTTTATAAACTGACACCTGAGGAACTTAGGGTGTCGGGATATGAAGTGGTTGTAGTTTTGGACGGAATAGTTGAACATACTGGAATGAACACACAGCCCAAGACATCATACACCAGTGATGAAATCTTGTGGGGTTACGACTTTGAAGATGTTATTGATAGACATTTTCTGAAGAATGGCCAATATTTTGTGGATTTTTTCAAAGTTTAA

Transcript

pspe_0.1.m1.59531.m1

Protein

Uniprot

Uniprot term	Description
P35561	Inward rectifier potassium channel 2 OS=Mus musculus OX=10090 GN=Kcnj2 PE=1 SV=1
Q4TZY1	ATP-sensitive inward rectifier potassium channel 12 OS=Bos taurus OX=9913 GN=KCNJ12 PE=2 SV=1
O19182	Inward rectifier potassium channel 2 OS=Bos taurus OX=9913 GN=KCNJ2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17655	IRK_C	Inward rectifier potassium channel C-terminal domain	Domain	Interproscan
PF01007	IRK	Inward rectifier potassium channel transmembrane domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041647	Domain	Inward rectifier potassium channel, C-terminal	Interproscan
IPR013518	Homologous_superfamily	Potassium channel, inwardly rectifying, Kir, cytoplasmic	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR016449	Family	Potassium channel, inwardly rectifying, Kir	Interproscan
IPR040445	Domain	Potassium channel, inwardly rectifying, transmembrane domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11767	INWARD RECTIFIER POTASSIUM CHANNEL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005242	Molecular Function	inward rectifier potassium channel activity	Interproscan
GO:0006813	Biological Process	potassium ion transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0034765	Biological Process	regulation of monoatomic ion transmembrane transport	Interproscan
GO:1990573	Biological Process	potassium ion import across plasma membrane	Interproscan