Gene detail

Detailed information of pspe_0.1.m1.5966.m1 in Pachyseris speciosa

Genomic Location: Sc0000007:639558...642700
NR annotation: KAJ7324075.1, Rad2 nuclease [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q24558	Exonuclease 1 OS=Drosophila melanogaster OX=7227 GN=tos PE=1 SV=1
Q803U7	Exonuclease 1 OS=Danio rerio OX=7955 GN=exo1 PE=2 SV=1
Q9W6K2	Exonuclease 1 OS=Xenopus laevis OX=8355 GN=exo1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00867	XPG_I	XPG I-region	Family	Interproscan
PF08797	HIRAN	HIRAN domain	Domain	Interproscan
PF00752	XPG_N	XPG N-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006086	Domain	XPG-I domain	Interproscan
IPR014905	Domain	HIRAN domain	Interproscan
IPR006085	Domain	XPG, N-terminal	Interproscan
IPR036279	Homologous_superfamily	5'-3' exonuclease, C-terminal domain superfamily	Interproscan
IPR029060	Homologous_superfamily	PIN-like domain superfamily	Interproscan
IPR019974	Conserved_site	XPG conserved site	Interproscan
IPR006084	Family	XPG/Rad2 endonuclease	Interproscan
IPR044752	Domain	Exonuclease 1-like, PIN-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11081	FLAP ENDONUCLEASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004518	Molecular Function	nuclease activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0016818	Molecular Function	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	Interproscan
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan
GO:0017108	Molecular Function	5'-flap endonuclease activity	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan