Detailed information of pspe_0.1.m1.5980.m1 in Pachyseris speciosa

Genomic Location: Sc0000007:870581...933725
NR annotation: CAH3140409.1, unnamed protein product [Pocillopora meandrina]
Species Pachyseris speciosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P53995Anaphase-promoting complex subunit 1 OS=Mus musculus OX=10090 GN=Anapc1 PE=1 SV=2
Q9H1A4Anaphase-promoting complex subunit 1 OS=Homo sapiens OX=9606 GN=ANAPC1 PE=1 SV=1
Q54NC6Anaphase-promoting complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=anapc1 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002209 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21282
all species →		APC1_3rdAPC1 beta sandwich domainDomainInterproscan
PF12859
all species →		ANAPC1Anaphase-promoting complex subunit 1 WD40 beta-propeller domainRepeatInterproscan
PF20518
all species →		Apc1_MidNAnaphase-promoting complex subunit 1 middle domainRepeatInterproscan
PF18122
all species →		APC1_CAnaphase-promoting complex sub unit 1 C-terminal domain DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048971
all species →		DomainAnaphase-promoting complex subunit 1, beta-sandwich domainInterproscan
IPR024990
all species →		FamilyAnaphase-promoting complex subunit 1Interproscan
IPR049255
all species →		DomainAnaphase-promoting complex subunit 1, N-terminal domainInterproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan
IPR046794
all species →		DomainAnaphase-promoting complex subunit 1, middle domainInterproscan
IPR041221
all species →		DomainAnaphase-promoting complex subunit 1, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12827
all species →		MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005680
all species →		Cellular Componentanaphase-promoting complexInterproscan
GO:0007091
all species →		Biological Processmetaphase/anaphase transition of mitotic cell cycleInterproscan
GO:0031145
all species →		Biological Processanaphase-promoting complex-dependent catabolic processInterproscan
GO:0060090
all species →		Molecular Functionmolecular adaptor activityInterproscan
GO:0070979
all species →		Biological Processprotein K11-linked ubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03348APC1, ANAPC1; anaphase-promoting complex subunit 1-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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