Detailed information of pspe_0.1.m1.59804.m1 in Pachyseris speciosa

Genomic Location: Sc0000982:249306...249991
NR annotation: PFX13527.1, Pogo transposable element with KRAB domain [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4W5G0Tigger transposable element-derived protein 2 OS=Homo sapiens OX=9606 GN=TIGD2 PE=1 SV=1
Q0VBL1Tigger transposable element-derived protein 2 OS=Mus musculus OX=10090 GN=Tigd2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF01527HTH_Tnp_1TransposaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR002514FamilyTransposase IS3/IS911familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19303TRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0004803Molecular Functiontransposase activityInterproscan
GO:0006313Biological ProcessDNA transpositionInterproscan

TOP