Detailed information of pspe_0.1.m1.60141.m1 in Pachyseris speciosa

Genomic Location: Sc0000998:177871...183518
NR annotation: CAH3111709.1, unnamed protein product [Porites lobata]
Species Pachyseris speciosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9D7N6Large ribosomal subunit protein uL30m OS=Mus musculus OX=10090 GN=Mrpl30 PE=1 SV=1
P0C2C1Large ribosomal subunit protein uL30m OS=Rattus norvegicus OX=10116 GN=Mrpl30 PE=1 SV=1
A8EZJ8Large ribosomal subunit protein uL30 OS=Rickettsia canadensis (strain McKiel) OX=293613 GN=rpmD PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010611 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00327
all species →		Ribosomal_L30Ribosomal protein L30p/L7eDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036919
all species →		Homologous_superfamilyLarge ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyInterproscan
IPR005996
all species →		FamilyLarge ribosomal subunit protein uL30, bacterial-typeInterproscan
IPR016082
all species →		DomainLarge ribosomal subunit protein uL30-like, ferredoxin-like fold domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15892
all species →		MITOCHONDRIAL RIBOSOMAL PROTEIN L30Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0015934
all species →		Cellular Componentlarge ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for pspe_0.1.m1.60141.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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