Detailed information of pspe_0.1.m1.60238.m1 in Pachyseris speciosa

Genomic Location: Sc0001003:33284...39265
NR annotation: XP_029192449.2, SPARC-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10591SPARC_Ca_bdgSecreted protein acidic and rich in cysteine Ca binding regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR019577DomainSPARC/Testican, calcium-binding domainInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR002350DomainKazal domainInterproscan
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13866SPARC OSTEONECTINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005518Molecular Functioncollagen bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan
GO:0050840Molecular Functionextracellular matrix bindingInterproscan

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